The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

SDAP Home Page
SDAP Overview
SDAP All
SDAP Food

Use SDAP All
Search SDAP All
List SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: February 25, 2013  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Gly m 1

Translate to AllerML
AllergenGly m 1
Typefoods
Species - Systematic NameGlycine max
Species - Common Namesoybean
KeywordsP34, 34 kDa maturing seed vacuolar thiol protease; Hydrophobic seed protein; EC
ClassIUIS

Gly m 1 - PubMedReference
Reference 1Gonzalez R, Varela J, Carreira J, Polo F, Soybean hydrophobic protein and soybean hull allergy. Lancet. 1995 Jul 1;346(8966):48-9.
Reference 2Gijzen M, Gonzalez R, Barber D, Polo F, Levels of airborne Gly m 1 in regions of soybean cultivation. J Allergy Clin Immunol. 2003 Oct;112(4):803-5.
Reference 3Gonzalez R, Duffort O, Calabozo B, Barber D, Carreira J, Polo F, Monoclonal antibody-based method to quantify Gly m 1. Its application to assess Allergy. 2000 Jan;55(1):59-64. environmental exposure to soybean dust.

Gly m 1 - Isoallergens
NoIsoallergen
1Gly m 1.0101
2Gly m 1.0102

Gly m 1 - Protein Sequences
SourceLink to SourceView SequenceFASTA@SDAPBLAST@NCBIBLAST@ExPASyPROSITE@PIR
GenBank123506Go!Go!Go!Go!Go!
GenBank1199563Go!Go!Go!Go!Go!
SwissProtP22895Go!Go!Go!Go!Go!
FASTA@SDAP: FASTA search against all SDAP allergen sequences performed at SDAP
BLAST@ExPASy: BLAST search performed at the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)
PROSITE@PIR: PROSITE search performed at PIR - Protein Information Resources

Gly m 1 - Protein Sequence Properties
Protein SequenceProtease cleavage sites
PeptideCutter@ExPASy
123506Go!
1199563Go!
P22895Go!
PeptideCutter@ExPASy: Protease cleavage sites predicted with PeptideCutter from the Expert Protein Analysis System (ExPASy) proteomics server of the Swiss Institute of Bioinformatics (SIB)

Gly m 1 - Protein Similarity, Classification and Clustering
Protein SequenceSuperfamilyInterPro
P22895Go!Go!

Gly m 1 - Protein Models
3D ModelSourceLink to SourceView SequenceView AlignmentGet ModelPicturePicture+90Picture+180Picture+270Jmol
Model 535GenBank123506Go!Go!Go!Go!Go!Go!Go!View!
Model 684GenBank1199563Go!Go!Go!Go!Go!Go!Go!View!
Model 819SwissProtP22895Go!Go!Go!Go!Go!Go!Go!View!


Gly m 1 - Pfam domains
SequencePfam sequencePfam familyAllergens from
this Pfam family
Pfam databasePfam regionFirst amino acidLast amino acid
123506       
 HPSE_SOYBNPF00234Go!Pfam A1577
  PF00234: Protease inhibitor/seed storage/LTP family
 HPSE_SOYBNPF00234Go!Pfam A2877
  PF00234: Protease inhibitor/seed storage/LTP family
1199563       
 P34_SOYBNPF00112Go!Pfam A1135356
  PF00112: Papain family cysteine protease
P22895       
 P34_SOYBNPF00112Go!Pfam A1135356
  PF00112: Papain family cysteine protease
Pfam is a database of multiple sequence alignments and hidden Markov models covering protein domains and families

Inspect MotifMate results for Gly m 1. AutoMotif contains a database of PCPMer motifs for allergens.
MotifMate home page
MotifMate summary
Browse MotifMate proteins
Browse MotifMate families


SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | Toolbox | News | Employment | Sitemap 
UT System | Reports to the State | Compact With Texans | Statewide Search
 
This site published by Ovidiu Ivanciuc
Copyright   2001-2013  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.