SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ YKNVRPDYLKNIWKVINWKYAGELYQKECP
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Pis v 4.0101, Sequence: EF470980 Sequence identity: 100.00 (230/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI Sequence 2 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI Sequence 2 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ Sequence 2 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ
Sequence 1 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ Sequence 2 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ
Sequence 1 YKNVRPDYLKNIWKVINWKYAGELYQKECP YKNVRPDYLKNIWKVINWKYAGELYQKECP Sequence 2 YKNVRPDYLKNIWKVINWKYAGELYQKECP
Alignment 2 Sequence 1: Sequence 2: Allergen Hev b 10.0101, Sequence: AAA16792 Sequence identity: 83.91 (193/230) Sequence 1 MALLSYVTRKTLTESLR--LGLKSHVRGLQTFTLPDLPYEYGALEPAISS MAL-S-VTRK-L--------GL----RGLQTF-LPDLPY-YGALEPAIS- Sequence 2 MALRSLVTRKNLPSAFKAATGL-GQLRGLQTFSLPDLPYDYGALEPAISG
Sequence 1 EIMQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGG EIMQLHHQKHHQTYITNYNKALEQL--AI-KGD--AVVKLQSAIKFNGGG Sequence 2 EIMQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGG
Sequence 1 HINHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAA H-NHSIFWKNL-PV-EGGGE-PHGSLGWAID--FGS-E-LIQ-MNAEGAA Sequence 2 HVNHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAA
Sequence 1 LQGSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYY LQGSGWVWL-LDKE-KKLVVETTANQDPLVTKGP-LVPLLGIDVWEHAYY Sequence 2 LQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYY
Sequence 1 LQYKNVRPDYLKNIWKVINWKYAGELYQKECP-- LQYKNVRPDYLKNIWKV-NWKYA-E-Y-KECP-- Sequence 2 LQYKNVRPDYLKNIWKVMNWKYASEVYAKECPSS
Alignment 3 Sequence 1: Sequence 2: Allergen Hev b 10.0102, Sequence: CAB53458 Sequence identity: 77.39 (178/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI ---------------------------QTF-LPDLPY-YGALEPAIS-EI Sequence 2 ---------------------------QTFSLPDLPYDYGALEPAISGEI
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI MQLHHQKHHQTYITNYNKALEQL--AI-KGD--AVVKLQSAIKFNGGGH- Sequence 2 MQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHV
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ NHSIFWKNL-PV-EGGGE-PHGSLGWAID--FGS-E-LIQ-MNAEG-ALQ Sequence 2 NHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGVALQ
Sequence 1 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ GSGWVWL-LDKE-KKLVVETTANQDPLVTKGP-LVPLLGIDVWEHAYYLQ Sequence 2 GSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQ
Sequence 1 YKNVRPDYLKNIWKVINWKYAGELYQKECP-- YKNVRPDYLKNIWKV-NWKYA-E-Y-KECP-- Sequence 2 YKNVRPDYLKNIWKVMNWKYASEVYAKECPSS
Alignment 4 Sequence 1: Sequence 2: Allergen Hev b 10.0103, Sequence: CAC13961 Sequence identity: 77.39 (178/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI ---------------------------QTF-LPDLPY-YGALEPAIS-EI Sequence 2 ---------------------------QTFSLPDLPYDYGALEPAISGEI
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI MQLHHQKHHQTYITNYNKALEQL--AI-KGD--AVVKLQSAIKFNGGGH- Sequence 2 MQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHV
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ NHSIFWKNL-PV-EGGGE-PHGSLGWAID--FGS-E-LIQ-MNAEGAAL- Sequence 2 NHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALR
Sequence 1 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ GSGWVWL-LDKE-KKLVVETTANQDPLVTKGP-LVPLLGIDVWEHAYYLQ Sequence 2 GSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQ
Sequence 1 YKNVRPDYLKNIWKVINWKYAGELYQKECP-- YKNVRPDYLKNIWKV-NWKYA-E-Y-KECP-- Sequence 2 YKNVRPDYLKNIWKVMNWKYASEVYAKECPSS
Alignment 5 Sequence 1: Sequence 2: Allergen Asp f 6, Sequence: Q92450 Sequence identity: 43.04 (99/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI ---------------------------Q--TLP-LPY-Y-AL-P-IS--I Sequence 2 -------------------------MSQQYTLPPLPYPYDALQPYISQQI
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI M-LHH-KHHQTY----N-ALE----A----D----V--Q-AIKFNGGGHI Sequence 2 MELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHI
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGS-LGWAIDTNFGSMEALIQRMNAEGAAL NHS-FWKNL-P---GGG-------L--AI----GS--------N------ Sequence 2 NHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGI
Sequence 1 QGSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYL QGSGW-WL--D----KL---TT--QDP----G----P--G-D-WEHAYYL Sequence 2 QGSGWGWLVTDGPKGKLDITTTHDQDPVT--GAA--PVFGVDMWEHAYYL
Sequence 1 QYKNVRPDYLKNIWKVINWKYAGELYQKECP-------- QY-N----Y-K-IW-VINW--A---Y------------- Sequence 2 QYLNDKASYAKGIWNVINWAEAENRYIAGDKGGHPFMKL
Alignment 6 Sequence 1: Sequence 2: Allergen Asp f 6, Sequence: AAB60779 Sequence identity: 43.04 (99/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI ---------------------------Q--TLP-LPY-Y-AL-P-IS--I Sequence 2 --------------GTSPIQTPINTMSQQYTLPPLPYPYDALQPYISQQI
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI M-LHH-KHHQTY----N-ALE----A----D----V--Q-AIKFNGGGHI Sequence 2 MELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHI
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGS-LGWAIDTNFGSMEALIQRMNAEGAAL NHS-FWKNL-P---GGG-------L--AI----GS--------N------ Sequence 2 NHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGI
Sequence 1 QGSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYL QGSGW-WL--D----KL---TT--QDP----G----P--G-D-WEHAYYL Sequence 2 QGSGWGWLVTDGPKGKLDITTTHDQDPVT--GAA--PVFGVDMWEHAYYL
Sequence 1 QYKNVRPDYLKNIWKVINWKYAGELYQKECP-------- QY-N----Y-K-IW-VINW--A---Y------------- Sequence 2 QYLNDKASYAKGIWNVINWAEAENRYIAGDKGGHPFMKL
Alignment 7 Sequence 1: Sequence 2: Allergen Mala s 11, Sequence: CAD68071 Sequence identity: 43.91 (101/230) Sequence 1 ------------MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYE ----------------S---R-T-----R-------R-----TLP-LPYE Sequence 2 PFYPIPSALPFPLPIHSLFSRRT--RLFRFS-RTAARAGTEHTLPPLPYE
Sequence 1 YGALEPAISSEIMQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKL Y-ALEP-IS--IM--HH-KHHQTY--N-N--------A----D------L Sequence 2 YNALEPFISADIMMVHHGKHHQTYVNNLNASTKAYNDAVQAQDVLKQMEL
Sequence 1 QSAIKFNGGGHINHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEAL --A-KFNGGGH-NH--FWK---P-S-GGG----G-L--AID--FG--E-- Sequence 2 LTAVKFNGGGHVNHALFWKTMAPQSQGGGQLNDGPLKQAIDKEFGDFEKF
Sequence 1 IQRMNAEGAALQGSGWVWLGLDKE-SKKLVVETTANQDPLVTKGPSLVPL -----A-----QGSGW-WLGL-K--S--LVV-----QD-L-T--P----- Sequence 2 KAAFTAKALGIQGSGWCWLGLSKTGSLDLVV--AKDQDTLTTHHP----I
Sequence 1 LGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYAGELYQKECP--- -G-D-WEHA-YLQYKN----YLK--W-V-NW--A---Y-------- Sequence 2 IGWDGWEHAWYLQYKNDKASYLKQWWNVVNWSEAESRYSEGLKASL
Alignment 8 Sequence 1: Sequence 2: Allergen Alt a 14.0101, Sequence: P86254 Sequence identity: 6.52 (15/230) Sequence 1 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI -------------------------------------------FN-GGHI Sequence 2 -------------------------------------------FNAGGHI
Sequence 1 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ NHS-FW-NL-P-S------------------------------------- Sequence 2 NHSLFWQNLAPASSNEAK--------------------------------
Sequence 1 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 YKNVRPDYLKNIWKVINWKYAGELYQKECP ------------------------------ Sequence 2 ------------------------------
|