SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Pol g 1.0101, Sequence: P83542 Sequence identity: 100.00 (42/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES Sequence 2 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES
Alignment 2 Sequence 1: Sequence 2: Allergen Pol d 1.0104, Sequence: AAS67044 Sequence identity: 95.24 (40/42) Sequence 1 --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY Sequence 2 ADDLTTLRNGTLDRGITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY
Sequence 1 DLFKES-------------------------------------------- DLF--S-------------------------------------------- Sequence 2 DLFQKSQISHQIAILIHGFLSTGNNENFDAMAKALIEIDNFLVISVDWKK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GACNAFASTNDVLGYSQAVGNTRHVGKYVADFTKLLVEQYKVPMSNIRLI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GHSLGAHTSGFAGKEVQRLKLGKYKEIIGLDPAGPSFLTSKCPDRLCETD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AEYVQAIHTSAILGVYYNVGSVDFYVNYGKSQPGCSEPSCSHTKAVKYLT
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ECIKRECCLIGTPWKSYFSTPKSISQCKRDTCVCVGLNAQSYPAKGSFYV
Sequence 1 ---------------- ---------------- Sequence 2 PVEKDAPYCHNEGIKL
Alignment 3 Sequence 1: Sequence 2: Allergen Pol d 1.0103, Sequence: AAS67043 Sequence identity: 95.24 (40/42) Sequence 1 --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY Sequence 2 ADDLTTLRNGTLDRGITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY
Sequence 1 DLFKES-------------------------------------------- DLF--S-------------------------------------------- Sequence 2 DLFQKSQISHQIAILIHGFLSTGNNENFDAMAKALIEIDNFLVISVDWKK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GACNAFASTNDVLGYSQAVGNTRHVGKYVADFTKLLVEQYKVPMSNIRLI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GHSLGAHTSGFAGKEVQRLKLGKYKEIIGLDPAGPSFLTSKCPDRLCETD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AEYVQAIHTSAILGVYYNVGSVDFYVNYGKSQPGCSEPSCSHTKAVKYLT
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ECIKRECCLIGTPWKSYFSTPKPISQCKRDTCVCVGLNAQSYPAKGSFYV
Sequence 1 ---------------- ---------------- Sequence 2 PVDKDAPYCHNEGIKL
Alignment 4 Sequence 1: Sequence 2: Allergen Pol d 1.0102, Sequence: AAS67042 Sequence identity: 95.24 (40/42) Sequence 1 --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY --------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY Sequence 2 ADDLTTLRNGTLDRGITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNY
Sequence 1 DLFKES-------------------------------------------- DLF--S-------------------------------------------- Sequence 2 DLFQKSQISHQIAILIHGFLSTGNNENFDAMAKALIEIDNFLVISVDWKK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GACNAFASTNDVLGYSQAVGNTRHVGKYVADFTKLLVEQYKVPMSNIRLI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GHSLGAHTSGFAGKEVQRLKLGKYKEIIGLDPAGPSFLTNKCPNRLCETD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AEYVQAIHTSAILGVYYNVGSVDFYVNYGKSQPGCSEPSCSHTKAVKYLT
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ECIKRECCLIGTPWKSYFSTPKPISQCKRDTCVCVGLNAQSYPAKGSFYV
Sequence 1 ---------------- ---------------- Sequence 2 PVEKDAPYCHNEGIKL
Alignment 5 Sequence 1: Sequence 2: Allergen Pol d 1.0101, Sequence: AAS67041 Sequence identity: 95.24 (40/42) Sequence 1 -----------------------------------GITPDCTFNEKDIEL -----------------------------------GITPDCTFNEKDIEL Sequence 2 MNFKYSILFICFVKVLDNCYAADDLTTLRNGTLDRGITPDCTFNEKDIEL
Sequence 1 HVYSRDKRNGIILKKEILKNYDLFKES----------------------- HVYSRDKRNGIILKKEILKNYDLF--S----------------------- Sequence 2 HVYSRDKRNGIILKKEILKNYDLFQKSQISHQIAILIHGFLSTGNNENFD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AMAKALIEIDNFLVISVDWKKGACNAFASTNDVLGYSQAVGNTRHVGKYV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ADFTKLLVEQYKVPMSNIRLIGHSLGAHTSGFAGKEVQRLKLGKYKEIIG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LDPAGPSFLTNKCPNRLCETDAEYVQAIHTSAILGVYYNVGSVDFYVNYG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KSQPGCSEPSCSHTKAVKYLTECIKRECCLIGTPWKSYFSTPKPISQCKR
Sequence 1 ------------------------------------- ------------------------------------- Sequence 2 DTCVCVGLNAQSYPAKGSFYVPVDKDAPYCHNEGIKL
Alignment 6 Sequence 1: Sequence 2: Allergen Pol e 1.0101, Sequence: 3989146 Sequence identity: 73.81 (31/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES-------- G--PDCTFNEKDI---VYSRDKR-GIILKK--L-NYDLF--S-------- Sequence 2 GMSPDCTFNEKDIVFYVYSRDKRDGIILKKDSLTNYDLFTKSITVSKQVV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FLIHGFLTSXXXXXXXSLSGALIEGDDFLVMSVDWKKXXXXXXXXXXGAL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GYSKXASIKDALGTYVADFTKLKLGKYKVLRXXXRGIGHSLGAHTSGFAG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KEVQKLKLGKYKEIIGLDPAGPSFLTSKCPDRLCESGTDYTQILHTSXXX
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GVYYNVGSVDFYVNYGKSQPGCNEPSCXXXKATKYLTECIKEECCLISTP
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 WFKYFSTPKPISQCRDTCVCVGLNAKSYPARGAFYAPVEANAPYCHNEGI
Sequence 1 -- -- Sequence 2 KL
Alignment 7 Sequence 1: Sequence 2: Allergen Pol a 1, Sequence: Q9U6W0 Sequence identity: 73.81 (31/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES-------- ---PDCTFNEKDI---VYSRDKR-GIILKKE-L-NYDLF--S-------- Sequence 2 -MSPDCTFNEKDIVFYVYSRDKRDGIILKKETLTNYDLFTKSTISKQVVF
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LIHGFLSTGNNENFVAMSKALIEKDDFLVISVDWKKGACNAFASTKDALG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 YSKAVGNTRHVGKFVADFTKLLVEKYKVLISNIRLIGHSLGAHTSGFAGK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 EVQKLKLGKYKEIIGLDPAGPYFHRSDCPDRLCVTDAEYVQVIHTSIILG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VYYNVGSVDFYVNYGKNQPGCNEPSCSHTKAVKYLTECIKHECCLIGTPW
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KKYFSTPKPISQCRGDTCVCVGLNAKSYPARGAFYAPVEANAPYCHNEGI
Sequence 1 -- -- Sequence 2 KL
Alignment 8 Sequence 1: Sequence 2: Allergen Poly p 1.0101, Sequence: ABN13879 Sequence identity: 57.14 (24/42) Sequence 1 -----------------GITPDCTFNEKDIELHVYSRDKRNGIILKKEIL -----------------G--P-C-FNE-DI---VY-R--R-GI-L--E-L Sequence 2 MNFKYSILFICFGTLDRGLIPECPFNEYDILFFVYTRQQRDGIVLTEETL
Sequence 1 KNYDLFKES----------------------------------------- -NYDLFK-S----------------------------------------- Sequence 2 QNYDLFKKSTISRQVVFIDHGFLSNGNNENFIAMAKALIEKDNFLVISVD
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 WKKGACNAFASTLDYLGYSTAVGNTRHVGKYVADFTKLLVEQYKVSMSNI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 RLIGHSLGAHTSGFAGKEVQELKLNKYSNIDGLDPAGPSFDSNDCPERLC
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ETDAEYVQIIHTSNILGVYSKIGTVDFYMNYGSHQPGCGRFFSPSCSHTK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 AVKYLTECIKHECCLIGTPWKKYFSTPKPISQCTKDTCVCVGLNAKSYPA
Sequence 1 ---------------------- ---------------------- Sequence 2 RGSFYVPVEATAPYCHNEGIKL
Alignment 9 Sequence 1: Sequence 2: Allergen Dol m 1.02, Sequence: P53357 Sequence identity: 35.71 (15/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES-------- GI-P-C------I------R--R-G--L----LKN---FK-S-------- Sequence 2 GILPECKLVPEEISFVLSTRENRDGVYLTLQKLKNGKMFKNSDLSSKKVP
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FLIHGFISSATNKNYADMTRALLDKDDIMVISIDWRDGACSNEFALLKFI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GYPKAVENTRAVGKYIADFSKILIQKYKVLLENIRLIGHSLGAQIAGFAG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KEFQRFKLGKYPEIIGLDPAGPSFKKKDCPERICETDAHYVQILHTSSNL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GTERTLGTVDFYINDGSNQPGCTYIIGETCSHTRAVKYLTECIRRECCLI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GVPQSKNPQPVSKCTRNECVCVGLNAKEYPKKGSFYVPVEAKAPFCNNNG
Sequence 1 --- --- Sequence 2 KII
Alignment 10 Sequence 1: Sequence 2: Allergen Vesp v 1.0101, Sequence: C0HLL3 Sequence identity: 28.57 (12/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES-------- G--P-C------I------R--RNG--L----LK-------S-------- Sequence 2 GLLPKCKLVPEQISFILSTRENRNGVFLTLDSLKKGGILNKSDLSSTQVV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FLIHGFISSANNSNYMDMTKALLEKNDCMVISIDWRNGACTNEFQILKFI
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GYPKAVENTRTVGKYIADFSKLLMQKYKVSLANIRLIGHSLGAQIAGFAG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KEYQKFKLGKYPEIIGLDPAGPLFKSNDCSQRICETDAHYVQIIHTSNNL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GTERTLGTVDFYMNNGYNQPGCYYSFIGETCSHTRAVQYFTECIRHECCL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IGVPQSKNPQPVSKCTRNECVCVGLNAKRYPKTGSFYVPVESKAPYCNNK
Sequence 1 ---- ---- Sequence 2 GKKI
Alignment 11 Sequence 1: Sequence 2: Allergen Ves m 1, Sequence: P51528 Sequence identity: 26.19 (11/42) Sequence 1 GITPDCTFNEKDIELHVYSRDKRNGIILKKEILKNYDLFKES-------- ---P-C-FN----------R--RN--------L-N---FK---------- Sequence 2 --GPKCPFNSDTVSIIIETRENRNRDLYTLQTLQNHPEFKKKTITRPVVF
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 ITHGFTSSASEKNFINLAKALVDKDNYMVISIDWQTAACTNEYPGLKYAY
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 YPTAASNTRLVGQYIATITQKLVKDYKISMANIRLIGHSLGAHVSGFAGK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 RVQELKLGKYSEIIGLDPARPSFDSNHCSERLCETDAEYVQIIHTSNYLG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 TEKILGTVDFYMNNGKNNPGCGRFFSEVCSHTRAVIYMAECIKHECCLIG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IPRSKSSQPISRCTKQECVCVGLNAKKYPSRGSFYVPVESTAPFCNNKGK
Sequence 1 -- -- Sequence 2 II
Alignment 12 Sequence 1: Sequence 2: Allergen Ves v 1, Sequence: P49369 Sequence identity: 26.19 (11/42) Sequence 1 ----------------------------------GITPDCTFNEKDIELH -------------------------------------P-C-FN------- Sequence 2 MEENMNLKYLLLFVYFVQVLNCCYGHGDPLSYELDRGPKCPFNSDTVSII
Sequence 1 VYSRDKRNGIILKKEILKNYDLFKES------------------------ ---R--RN--------L-N---FK-------------------------- Sequence 2 IETRENRNRDLYTLQTLQNHPEFKKKTITRPVVFITHGFTSSASETNFIN
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LAKALVDKDNYMVISIDWQTAACTNEAAGLKYLYYPTAARNTRLVGQYIA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 TITQKLVKHYKISMANIRLIGHSLGAHASGFAGKKVQELKLGKYSEIIGL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 DPARPSFDSNHCSERLCETDAEYVQIIHTSNYLGTEKTLGTVDFYMNNGK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 NQPGCGRFFSEVCSHSRAVIYMAECIKHECCLIGIPKSKSSQPISSCTKQ
Sequence 1 ------------------------------------ ------------------------------------ Sequence 2 ECVCVGLNAKKYPSRGSFYVPVESTAPFCNNKGKII
|