SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MHLITALVLLLQLIHFITSSPIPQEVVGGPGPVVGGSGIGNVWEKANEQA AEQQNIGGPGPVISGSGIGDVWNKANEPAEQQENIGGPGPVVSGSGIGNV WEKANEQAAHQQSIEGPGPVVSGSGIGNVWEKANEQAAHQQSIEGPGPVV SGSGIGDVWNKANEQAAEQQNIGGPGPVISGSGIGNVWEKANEQAAEQQN IGVGGPGPVKSGSGIGNVWEETNEEAASMQA
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Ani s 10.0101, Sequence: ACZ95445 Sequence identity: 100.00 (231/231) Sequence 1 MHLITALVLLLQLIHFITSSPIPQEVVGGPGPVVGGSGIGNVWEKANEQA MHLITALVLLLQLIHFITSSPIPQEVVGGPGPVVGGSGIGNVWEKANEQA Sequence 2 MHLITALVLLLQLIHFITSSPIPQEVVGGPGPVVGGSGIGNVWEKANEQA
Sequence 1 AEQQNIGGPGPVISGSGIGDVWNKANEPAEQQENIGGPGPVVSGSGIGNV AEQQNIGGPGPVISGSGIGDVWNKANEPAEQQENIGGPGPVVSGSGIGNV Sequence 2 AEQQNIGGPGPVISGSGIGDVWNKANEPAEQQENIGGPGPVVSGSGIGNV
Sequence 1 WEKANEQAAHQQSIEGPGPVVSGSGIGNVWEKANEQAAHQQSIEGPGPVV WEKANEQAAHQQSIEGPGPVVSGSGIGNVWEKANEQAAHQQSIEGPGPVV Sequence 2 WEKANEQAAHQQSIEGPGPVVSGSGIGNVWEKANEQAAHQQSIEGPGPVV
Sequence 1 SGSGIGDVWNKANEQAAEQQNIGGPGPVISGSGIGNVWEKANEQAAEQQN SGSGIGDVWNKANEQAAEQQNIGGPGPVISGSGIGNVWEKANEQAAEQQN Sequence 2 SGSGIGDVWNKANEQAAEQQNIGGPGPVISGSGIGNVWEKANEQAAEQQN
Sequence 1 IGVGGPGPVKSGSGIGNVWEETNEEAASMQA IGVGGPGPVKSGSGIGNVWEETNEEAASMQA Sequence 2 IGVGGPGPVKSGSGIGNVWEETNEEAASMQA
Alignment 2 Sequence 1: Sequence 2: Allergen Ani s 11.0101, Sequence: BAJ78220 Sequence identity: 51.95 (120/231) Sequence 1 MHLITALVLLLQLIHFITSSPI-------PQEVVGGPGPVVGGSGIGNVW MH----L-L-LQL------S-I-------P---VGGPGP---G-G--NVW Sequence 2 MHSTAILLLVLQLSCYFAASFILPGGANPPRFPVGGPGPIISGDGV-NVW
Sequence 1 EKAN------EQAAEQQ-NIG-----GPGPVISGSGIGDVWNKANEPAEQ -KAN--------A---Q-NI------GPGPV-SGSGIG-V---------- Sequence 2 QKANSIPKLKDNAGQRQVNIPPPFIRGPGPVVSGSGIGEV---------G
Sequence 1 QENIGGPGPVVSGSGIGNVWEKANEQAAHQQSIEGPGPVVSGSGIG---- Q--IGGPGPVVSGSGIG-V----------Q--I-GPGPVVSGSGIG---- Sequence 2 QIPIGGPGPVVSGSGIGQVFPPQS----GQLPIGGPGPVVSGSGIGGGAN
Sequence 1 ------------------NVWEKAN------EQAAHQQS------IEGPG ------------------NVW-KAN--------A---Q-------I-GPG Sequence 2 PPRFPVGGPGPIISGDGVNVWQKANSIPKLKDNAGQRQVNIPPPFIRGPG
Sequence 1 PVVSGSGIGDVWNKANEQAAEQQNIGGPGPVISGSGIGNVWEKANEQAAE PVVSGSGIG-V----------Q--IGGPGPV-SGSGIG-V------Q--- Sequence 2 PVVSGSGIGEVG---------QIPIGGPGPVVSGSGIGQVFPPQSGQ---
Sequence 1 QQNIGVGGPGPVKSGSGIGNVWEETNEEAASMQA---------------- ------GGPGPV-SGSGIG------------------------------- Sequence 2 ---LPIGGPGPVVSGSGIGGGANPPRFPVGGPGPIISGDGVNVLQKANSI
Sequence 1 ------------------------------------ ------------------------------------ Sequence 2 PKLKGNANPPQLPVGGPGPVISVDGESVLQKEENSL
|