SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK ANQVTGDDILFLSDPDARFSKSIGWADEEGRTKRYALVIDHGKITYAALE PAKNHLEFSSAETVLKHL
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Asp f 3, Sequence: O43099 Sequence identity: 100.00 (168/168) Sequence 1 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL Sequence 2 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL
Sequence 1 FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK Sequence 2 FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK
Sequence 1 ANQVTGDDILFLSDPDARFSKSIGWADEEGRTKRYALVIDHGKITYAALE ANQVTGDDILFLSDPDARFSKSIGWADEEGRTKRYALVIDHGKITYAALE Sequence 2 ANQVTGDDILFLSDPDARFSKSIGWADEEGRTKRYALVIDHGKITYAALE
Sequence 1 PAKNHLEFSSAETVLKHL PAKNHLEFSSAETVLKHL Sequence 2 PAKNHLEFSSAETVLKHL
Alignment 2 Sequence 1: Sequence 2: Allergen Pen c 3, Sequence: AAD42074 Sequence identity: 80.95 (136/168) Sequence 1 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL ---LKAGDSFP--V-FSYIPW-ED--EIT-CGIPINYNASKE-A-KKV-L Sequence 2 -MSLKAGDSFPEGVTFSYIPWAEDASEITSCGIPINYNASKEFANKKVVL
Sequence 1 FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK FALPGAFTPVCSA-HVPEYI-KLPE-RAKGVD-VAVLAYNDAYVMSAWGK Sequence 2 FALPGAFTPVCSANHVPEYIQKLPELRAKGVDQVAVLAYNDAYVMSAWGK
Sequence 1 ANQVTGDDILFLSDPDARFSKSIGWADEEGRTKRYALVIDHGKITYAALE AN-VTGDDILFLSDP-A-FSKSIGWADEEGRT-RY-LVID-GKI-YAA-E Sequence 2 ANGVTGDDILFLSDPEAKFSKSIGWADEEGRTYRYVLVIDNGKIIYAAKE
Sequence 1 PAKNHLEFSSAETVLKHL -AKN-LE-S-A--VLK-L Sequence 2 AAKNSLELSRADHVLKQL
Alignment 3 Sequence 1: Sequence 2: Allergen Mala f 2, Sequence: P56577 Sequence identity: 41.67 (70/168) Sequence 1 ----MSGLKAGDSFPSDVVFSYIPWSE--DKGEITACGIPINYNASKEWA ----------G---P-D----YIPW----D-GE---CGIP-------EW- Sequence 2 MPGDPTATAKGNEIP-DTLMGYIPWTPELDSGEV--CGIPTTFKTRDEWK
Sequence 1 DKKVILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYV -KKV-----PGA-TP-C---H-P-------E--AKGVD-V-V-A-ND--V Sequence 2 GKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFV
Sequence 1 MSAWGKANQVTGDDILFLSDPDARFSKSIGW-----ADEEG-RTKRYALV M-AWG--N----D---F--D-D--FSK--G------A---G-RT-RYAL- Sequence 2 MAAWGNFNNAK-DKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALI
Sequence 1 IDHGKIT-YAALEPAKNHLEFSSAETVLKHL ID--KI---A--E-----L---S--T-L--- Sequence 2 IDDNKIVDFASDEGDTGKLQNASIDTILTKV
Alignment 4 Sequence 1: Sequence 2: Allergen Mala s 5, Sequence: CAA09883 Sequence identity: 44.05 (74/168) Sequence 1 MSGLKAGDSFPSDVVFSYIPWSE--DKGEITACGIPINYNASKEWADKKV ------G---P----F-YIPW----D-G----CG-P----A---W--KKV Sequence 2 -MSATTGSQAP-NTTFTYIPWAPELDSGKV--CGVPQTFKAHDRWKGKKV
Sequence 1 ILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAW ---A-PGAFTP-C---H-P---EK--E--AKGVD-V-V-A-NDA-VMS-W Sequence 2 VVVAIPGAFTPACHQNHIPGFVEKINELKAKGVDEVVVIAVNDAFVMSGW
Sequence 1 GKANQVTG-DDILFLSDPDARFSKSIGWADE--EG----RTKRYALVIDH G----V-G-D-I----D-D--FSK--G-------G----RT-RYA-V-D- Sequence 2 GVT--VGGKDQIVYACDNDLAFSKALGGTLDLTSGGMGVRTARYAVVLDD
Sequence 1 GKITYAALEPAK-NHLEFSSAETVLKHL -KITY-----------E-SS---VL--L Sequence 2 LKITYFGMDEGNMGAPEKSSVDAVLAQL
Alignment 5 Sequence 1: Sequence 2: Allergen Mala f 3, Sequence: P56578 Sequence identity: 38.10 (64/168) Sequence 1 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL ------G---P----F-Y-P-S--------CG-P--------W--KKV-- Sequence 2 ----EIGSTIP-NATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVI
Sequence 1 FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK -A-PGAFTP-C-A-HVP-Y-EK--E---KGVD-V-V---ND--V-SAWG- Sequence 2 VAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGI
Sequence 1 ANQVTGDDILFLSDPDARFSKSIGWA---DEEG---RTKRYALVIDHGKI ------D---F--D----FSK-----------G---RT-RYAL-----K- Sequence 2 TEHAK-DNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKV
Sequence 1 TYAALEPAKNHLEFSSAETVLKHL -Y------------SSA-TVL--L Sequence 2 EYFGIDEGEPKQ--SSAATVLSKL
Alignment 6 Sequence 1: Sequence 2: Allergen Cand b 2, Sequence: AAA34358 Sequence identity: 36.31 (61/168) Sequence 1 MSGLKAGDSFPS-DVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVI M---K-GD-FP--D-V--YIP-----GE------P-----SK----KK-- Sequence 2 MAPIKRGDRFPTTDDVY-YIP--PEGGE------PGAFELSKFVKTKKFV
Sequence 1 LFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWG ----PGAFTP-C---H-P-YI--LP-I--KGVD-V-V---ND--V---W- Sequence 2 VVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWK
Sequence 1 KA-NQVTGDDILFLSDPDARFSKSIGWADEEG------RTKRYALVIDH- K-----------F-SDP-----K--G------------R--R-AL----- Sequence 2 KELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRS
Sequence 1 GKITYAALEPAKNHLEFSSAETVLKHL G---YAA-E--------S-A------L Sequence 2 GIVEYAAIENG-GEVDVSTAQKIIAKL
Alignment 7 Sequence 1: Sequence 2: Allergen Cand b 2, Sequence: AAA34357 Sequence identity: 36.31 (61/168) Sequence 1 MSGLKAGDSFPS-DVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVI M---K-GD-FP--D-V--YIP-----GE------P-----SK----KK-- Sequence 2 MAPIKRGDRFPTTDDVY-YIP--PEGGE------PGPLELSKFVKTKKFV
Sequence 1 LFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWG ----PGAFTP-C---H-P-YI--LP-I--KGVD-V-V---ND--V---W- Sequence 2 VVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWK
Sequence 1 KA-NQVTGDDILFLSDPDARFSKSIGWADEEG------RTKRYALVIDH- K-----------F-SDP-----K--G------------R--R-AL----- Sequence 2 KELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRS
Sequence 1 GKITYAALEPAKNHLEFSSAETVLKHL G---YAA-E--------S-A------L Sequence 2 GIVEYAAIENG-GEVDVSTAQKIIAKL
Alignment 8 Sequence 1: Sequence 2: Allergen Tri a 32.0101, Sequence: AAQ74769 Sequence identity: 16.07 (27/168) Sequence 1 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVIL -----------------------------------------------VIL Sequence 2 ---------------MPGLTIGDTVPNLELDSTHGKIRIHDYVGNGYVIL
Sequence 1 FALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGK F--PG-FTPVC-------------E----GV---------D------W-K Sequence 2 FSHPGDFTPVCTTE-LAAMANYAKEFEKRGVKLLGI-SCDDVQSHKEWTK
Sequence 1 ANQV--TGDDILF--LSDPDARFSKSIGWADEEGRTKRYALVIDHGKITY -------G---------DPD----K-----D---------L------I-- Sequence 2 DIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEGQLPSRTLHIVG
Sequence 1 AALEPAKNHLEFSSAETVLKHL---------------------------- ---------L--S------------------------------------- Sequence 2 PDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWNPGECVV
Sequence 1 ----------------------------------- ----------------------------------- Sequence 2 IAPGVSDDEAKKMFPQGFETADLPSKKGYLRFTKV
|