SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: KRSFILRSADMYFKYTAAALAAVLPLCSAQTWSKCNPLEKTCPPNKGLAA STYTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDWEVLGGDTTQVQTNYFGKG DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK GGTRFPQTPMRLRLGSWAGGDPSNPKGTIEWAGGLTDYSAGPYTMYVKSV RIENANPAESYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASS TS
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Asp f 9, Sequence: CAA11266 Sequence identity: 100.00 (302/302) Sequence 1 KRSFILRSADMYFKYTAAALAAVLPLCSAQTWSKCNPLEKTCPPNKGLAA KRSFILRSADMYFKYTAAALAAVLPLCSAQTWSKCNPLEKTCPPNKGLAA Sequence 2 KRSFILRSADMYFKYTAAALAAVLPLCSAQTWSKCNPLEKTCPPNKGLAA
Sequence 1 STYTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF STYTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF Sequence 2 STYTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF
Sequence 1 FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDWEVLGGDTTQVQTNYFGKG FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDWEVLGGDTTQVQTNYFGKG Sequence 2 FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDWEVLGGDTTQVQTNYFGKG
Sequence 1 DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK Sequence 2 DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK
Sequence 1 GGTRFPQTPMRLRLGSWAGGDPSNPKGTIEWAGGLTDYSAGPYTMYVKSV GGTRFPQTPMRLRLGSWAGGDPSNPKGTIEWAGGLTDYSAGPYTMYVKSV Sequence 2 GGTRFPQTPMRLRLGSWAGGDPSNPKGTIEWAGGLTDYSAGPYTMYVKSV
Sequence 1 RIENANPAESYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASS RIENANPAESYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASS Sequence 2 RIENANPAESYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSASS
Sequence 1 TS TS Sequence 2 TS
Alignment 2 Sequence 1: Sequence 2: Allergen Asp f 16, Sequence: AAC61261 Sequence identity: 75.17 (227/302) Sequence 1 KRSFILRSADMYFKYTAAALAAVLPLCSAQTWSKCNPLEKTCPPNKGLAA ----------MYFKYTAAALAAVLPLCSAQTWSKCNPL--TCPPNKGLAA Sequence 2 ----------MYFKYTAAALAAVLPLCSAQTWSKCNPLAETCPPNKGLAA
Sequence 1 STYTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF ST-TADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF Sequence 2 STCTADFTSASALDQWEVTAGKVPVGPQGAEFTVAKQGDAPTIDTDFYFF
Sequence 1 FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDWEVLGGDTTQVQTNYFGKG FGKAEVVMKAAPGTGVVSSIVLESDDLDEVD---LGGDTTQVQTNYFGKG Sequence 2 FGKAEVVMKAAPGTGVVSSIVLESDDLDEVDLVRLGGDTTQVQTNYFGKG
Sequence 1 DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK Sequence 2 DTTTYDRGTYVPVATPQETFHTYTIDWTKDAVTWSIDGAVVRTLTYNDAK
Sequence 1 GGTRFPQTPMRLRLGSWAGGDPSNPKGTIEWAGGLTDYSAGPYTMYVKSV GGTRFPQTPMRLRL-------P--P-------G---D---------V--V Sequence 2 GGTRFPQTPMRLRLAAGPAATPATPGH--HRVGRWLDRLQRGTVHHVRQV
Sequence 1 R-IENANPAESYTYSDNSGSWQSIKFDGSVDISSSSSVTSSTTSTASSAS R------P------------------------SSSSSVTSSTTSTASSAS Sequence 2 RPYRERQPRRVLHLLGQLWLLAEHQVRRLRRYSSSSSVTSSTTSTASSAS
Sequence 1 STS----------------------------------------------- STS----------------------------------------------- Sequence 2 STSSKTPSTSTLATSTKATPTPSGTSSGSNSSSSAEPTTTGGSGSSNTGS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 WLRLRLWLWLYSSTGSSTSAGASATPELSQGAAGSIKGSVTPALWCSAPS
Sequence 1 --------------------------------------- --------------------------------------- Sequence 2 LPCWHSKQNDDFGLMHDTHHEGDVRTIHFGIGVSPSFGV
|