SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: ELNKTKPIWTRNPADITQEEYASFYKSLSNDWEDHLAVKHFSVEGQLEFR AILYVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLGFIKGV VDSEDLPLNLSRETLQQNKIMKVIKKNIVKKTLELFNEIAEDREQFDKFY SAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQ KQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDG KKLVDITKDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVS HKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPK SSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERI HKLVSLGLNIDEEAETTEEKATEEAAPAEATTGESAMEEVD
No | Allergen | Sequence Link in SwissProt/NCBI/PIR | View Sequence | Sequence Length | bit score | E score | 1 | Asp f 12 | P40292 | Go! | 441 | 537.4 | 5.3e-154 |
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Asp f 12, Sequence: P40292 Sequence identity: 100.00 (441/441) Sequence 1 ELNKTKPIWTRNPADITQEEYASFYKSLSNDWEDHLAVKHFSVEGQLEFR ELNKTKPIWTRNPADITQEEYASFYKSLSNDWEDHLAVKHFSVEGQLEFR Sequence 2 ELNKTKPIWTRNPADITQEEYASFYKSLSNDWEDHLAVKHFSVEGQLEFR
Sequence 1 AILYVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLGFIKGV AILYVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLGFIKGV Sequence 2 AILYVPKRAPFDLFETKKTKNNIKLYVRRVFITDDATDLIPEWLGFIKGV
Sequence 1 VDSEDLPLNLSRETLQQNKIMKVIKKNIVKKTLELFNEIAEDREQFDKFY VDSEDLPLNLSRETLQQNKIMKVIKKNIVKKTLELFNEIAEDREQFDKFY Sequence 2 VDSEDLPLNLSRETLQQNKIMKVIKKNIVKKTLELFNEIAEDREQFDKFY
Sequence 1 SAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQ SAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQ Sequence 2 SAFSKNIKLGIHEDAQNRQTLAKLLRYQSTKSGDEATSLADYVTRMPEHQ
Sequence 1 KQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDG KQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDG Sequence 2 KQIYYITGESIKAVAKSPFLDSLKQKNFEVLFLVDPIDEYAFTQLKEFDG
Sequence 1 KKLVDITKDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVS KKLVDITKDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVS Sequence 2 KKLVDITKDFELEETEEEKAEREKEEKEYENLAKSLKNILGDKVEKVVVS
Sequence 1 HKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPK HKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPK Sequence 2 HKLVGSPCAIRTGQFGWSANMERIMKAQALRDTSMSSYMSSKKTFEISPK
Sequence 1 SSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERI SSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERI Sequence 2 SSIIKELKKKVEADGENDRTVKSITQLLFETSLLVSGFTIEEPASFAERI
Sequence 1 HKLVSLGLNIDEEAETTEEKATEEAAPAEATTGESAMEEVD HKLVSLGLNIDEEAETTEEKATEEAAPAEATTGESAMEEVD Sequence 2 HKLVSLGLNIDEEAETTEEKATEEAAPAEATTGESAMEEVD
|