The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

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SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: February 25, 2013  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Pol a 2

Sequence Q9U6V9

Full FASTA alignment

Sequence name:
Query sequence:
YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
FAVNVTETVNGRSSLNF

NoAllergenSequence Link in
SwissProt/NCBI/PIR
View SequenceSequence
Length
bit scoreE score
1Pol a 2Q9U6V9Go!367579.85.2e-167
2Dol m 2P49371Go!331425.71.1e-120
3Ves v 2.0101P49370Go!331413.55.4e-117
4Ves v 2.0201AAX14718Go!340333.28.3e-93
5Api m 2Q08169Go!382294.93.0e-81
6Tab y 2.0101ADM18346Go!349214.25.6e-57
7Ves m 2.01016736487Go!3136.91.1e-04

Alignment made with FASTA 3.45
As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.

Alignment 1
Sequence 1:
Sequence 2: Allergen Pol a 2, Sequence: Q9U6V9
Sequence identity: 100.00 (367/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
Sequence 2 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ

Sequence 1 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
           YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
Sequence 2 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN

Sequence 1 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
           GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
Sequence 2 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN

Sequence 1 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
           TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
Sequence 2 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT

Sequence 1 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
           RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
Sequence 2 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS

Sequence 1 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
           VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
Sequence 2 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI

Sequence 1 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
           YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
Sequence 2 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP

Sequence 1 FAVNVTETVNGRSSLNF
           FAVNVTETVNGRSSLNF
Sequence 2 FAVNVTETVNGRSSLNF



Alignment 2
Sequence 1:
Sequence 2: Allergen Dol m 2, Sequence: P49371
Sequence identity: 68.66 (252/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           -----------------------------S-RPKRVF-IYWNVPTFMCHQ
Sequence 2 -----------------------------SERPKRVFNIYWNVPTFMCHQ

Sequence 1 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
           YG--FDEVT-FNIKHNSKD-F-G--ISI-YDPG-FPAL-PLK-GNY--RN
Sequence 2 YGLYFDEVTNFNIKHNSKDDFQGDKISIFYDPGEFPALLPLKEGNYKIRN

Sequence 1 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
           GGVPQ-GNITIHLQ-F-E-LDK--P--NF-GIGVIDFERW-PIFRQNWGN
Sequence 2 GGVPQEGNITIHLQRFIENLDKTYPNRNFNGIGVIDFERWRPIFRQNWGN

Sequence 1 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
           --IHKK-SI-LVR-EHP-W---MIE-EA-K-FEKYAR-FMEETLKLAKKT
Sequence 2 MMIHKKFSIDLVRNEHPFWDKKMIELEASKRFEKYARLFMEETLKLAKKT

Sequence 1 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
           RK-A-WGYYG-PYC-N--PNN--PDCDA-A--END--SW--NNQ--L-PS
Sequence 2 RKQADWGYYGYPYCFNMSPNNLVPDCDATAMLENDKMSWLFNNQNVLLPS

Sequence 1 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
           VY-RHE--P--RV-LVQGR-KEAVRISNNL-HSP-VL-YWWYVYQD----
Sequence 2 VYIRHELTPDQRVGLVQGRVKEAVRISNNLKHSPKVLSYWWYVYQDDTNT

Sequence 1 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
           -L-ETDV-KTFQEI--NGGDGIIIWGSSSDVNSLSKCKRLREYLL--LGP
Sequence 2 FLTETDVKKTFQEIAINGGDGIIIWGSSSDVNSLSKCKRLREYLLTVLGP

Sequence 1 FAVNVTETVNGRSSLNF
           --VNVTETVN-------
Sequence 2 ITVNVTETVN-------



Alignment 3
Sequence 1:
Sequence 2: Allergen Ves v 2.0101, Sequence: P49370
Sequence identity: 65.67 (241/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           -----------------------------S-RPKRVF-IYWNVPTFMCHQ
Sequence 2 -----------------------------SERPKRVFNIYWNVPTFMCHQ

Sequence 1 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
           Y---FDEVT-FNIK-NSKD-F-G--I-I-YDPG-FPAL--LK-G-Y--RN
Sequence 2 YDLYFDEVTNFNIKRNSKDDFQGDKIAIFYDPGEFPALLSLKDGKYKKRN

Sequence 1 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
           GGVPQ-GNITIHLQ-F-E-LDK--P--NF-GIGVIDFERW-PIFRQNWGN
Sequence 2 GGVPQEGNITIHLQKFIENLDKIYPNRNFSGIGVIDFERWRPIFRQNWGN

Sequence 1 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
           --IHK--SI-LVR-EHP-W---MIE-EA-K-FEKYAR-FMEETLKLAKKT
Sequence 2 MKIHKNFSIDLVRNEHPTWNKKMIELEASKRFEKYARFFMEETLKLAKKT

Sequence 1 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
           RK-A-WGYYG-PYC-N--PNN--P-CD--A--END--SW--NNQ--L-PS
Sequence 2 RKQADWGYYGYPYCFNMSPNNLVPECDVTAMHENDKMSWLFNNQNVLLPS

Sequence 1 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
           VYVR-E--P--R--LVQGR-KEAVRISNNL-HSP-VL-YWWYVYQD----
Sequence 2 VYVRQELTPDQRIGLVQGRVKEAVRISNNLKHSPKVLSYWWYVYQDETNT

Sequence 1 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
           -L-ETDV-KTFQEIV-NGGDGIIIWGSSSDVNSLSKCKRL--YLL--LGP
Sequence 2 FLTETDVKKTFQEIVINGGDGIIIWGSSSDVNSLSKCKRLQDYLLTVLGP

Sequence 1 FAVNVTETVNGRSSLNF
           -A-NVTE-VN-------
Sequence 2 IAINVTEAVN-------



Alignment 4
Sequence 1:
Sequence 2: Allergen Ves v 2.0201, Sequence: AAX14718
Sequence identity: 52.04 (191/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           ----------------------------R---PK--FSIYWN-PT--CH-
Sequence 2 ---------------------------DRTIWPKKGFSIYWNIPTHFCHN

Sequence 1 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
           -G--F-E---FNIK-NS--NFRGETIS--YDPG-FP----LKNG-YE-RN
Sequence 2 FGVYFKELKQFNIKYNSMNNFRGETISLFYDPGNFPSMVLLKNGTYEIRN

Sequence 1 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
           -GVPQ-GN-TIHL-QF---LD---P-K--GGIGVI-F--W-PIFR-N--N
Sequence 2 EGVPQKGNLTIHLEQFTKELDEIYPKKIAGGIGVIHFHNWRPIFRRNVDN

Sequence 1 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
           --I-K--SI-LVRKEHPKW--SMIE-EA---FE--A--FME-TLKLAK--
Sequence 2 LKINKDISIDLVRKEHPKWDKSMIEKEASNRFETSAKIFMEKTLKLAKEI

Sequence 1 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
           RK---WGY-G-P-C-------P--DCDA----END--SW--NNQ--L-PS
Sequence 2 RKKTEWGYHGYPHCLSGSTDKPSFDCDALSMSENDKMSWLFNNQNVLLPS

Sequence 1 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
           -Y-----KP-E---LVQ-R-KEA-RIS-N--H-P-VL-YWWY-YQDK--I
Sequence 2 IYLKNVLKPDEKIHLVQERLKEAIRISKNFKHLPKVLPYWWYTYQDKESI

Sequence 1 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
           -L-E-DV--TF-EI-TNG-DGIIIWG-S--------C--L-EYL---LGP
Sequence 2 FLTEADVKNTFKEILTNGADGIIIWGVSYELTDRKRCEKLKEYLMKILGP

Sequence 1 FAVNVTETVNGRSSLNF
           -A--VT--V-----LNF
Sequence 2 IAFKVTKAVKENTPLNF



Alignment 5
Sequence 1:
Sequence 2: Allergen Api m 2, Sequence: Q08169
Sequence identity: 48.23 (177/367)
Sequence 1 ------YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVP
           --------------V-------------------------R-F--YWNVP
Sequence 2 MSRPLVITEGMMIGVLLMLAPINALLLGFVQSTPDNNKTVREFNVYWNVP

Sequence 1 TFMCHQYGMNFDEVTD-FNIKHNSKDNFRGETISIYYDPGKFPALMPLKN
           TFMCH-YG--F-EV-----I--N--D-FRGE-I-I-YDPG-FPAL----N
Sequence 2 TFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPN

Sequence 1 GNYEERNGGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPI
           GN---RNGGVPQ-GN-T-HLQ-F---L----PDK-F-G-GVIDFE-W-PI
Sequence 2 GNVVARNGGVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGVIDFESWRPI

Sequence 1 FRQNWGNTEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEET
           FRQNW------KK-S-E-VR-EHP-W-----E-EA---FEKY---FMEET
Sequence 2 FRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKYGQLFMEET

Sequence 1 LKLAKKTRKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNN
           LK-AK--R--A-WGYY--PYCYN-TPN-P---C-A----END--SW----
Sequence 2 LKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFES

Sequence 1 QEILFPSVYVRHEQKPEERVYLVQGRIKEAVRISNNLEHS-PSVLAYWWY
           ---L-PSVY-R------ERV-LV-GR-KEA-RI------S---VL-Y-WY
Sequence 2 EDVLLPSVYLRWNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYYWY

Sequence 1 VYQDKMDIYLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLRE
           -YQD--D--LS--D-E-T---I---G-DG-IIWGSS-D-N---KC---RE
Sequence 2 KYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFRE

Sequence 1 YLLNTLGPFA--VNVTETVNGRSSLNF-----
           YL-N-LGP-----------N-R----------
Sequence 2 YLNNELGPAVKRIALNNNANDRLTVDVSVDQV



Alignment 6
Sequence 1:
Sequence 2: Allergen Tab y 2.0101, Sequence: ADM18346
Sequence identity: 37.06 (136/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           ----------------------------------R-F--YWN-PTFMC--
Sequence 2 -----------MKLHQGLVCLSVLILLPTCILGDRKFEVYWNIPTFMCPD

Sequence 1 YGMNFDEVTDFNIKH----NSKDNFRGETISIYYDPGKFPALMPLKNGN-
           ---------D-N-KH----N--D-FRG--IS--Y-PG-FPA----K--N-
Sequence 2 QNKT---IMDLNKKHGVIQNTEDLFRGDKISLLYHPGAFPAITRNKTTNT

Sequence 1 --YEERNGGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPI
           --YE--NGGVPQ-GN---HL-----D------DKNF-G--VIDFE-W-PI
Sequence 2 LIYE--NGGVPQAGNLSLHLKLLEKDINEQITDKNFSGLAVIDFELWRPI

Sequence 1 FRQNWGNTEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEET
           FRQN-G--------S--L----HP---E-----EA----EK--R-F---T
Sequence 2 FRQNGGSLSDYQNLSLKLEKDLHPEFNEDQLRKEAERRIEKFGRSFIKQT

Sequence 1 LKLAKKTRKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNN
           L--AKK-R--A-WGYY-FPYC-N---------C---A-I-NDR---M--N
Sequence 2 LIKAKKLRPKAQWGYYAFPYCFNGRRRYVDT-CIPSAKIDNDRILYMFEN

Sequence 1 QEILFPSVYVRHEQKPEERVYLVQGRIKEAVRISNNLEH--SPSVLAYWW
           -----P-VY------------LV-GR--EAVR----------P-VL-Y--
Sequence 2 SDVIYPAVYLQTDLAQKNQTGLVKGRVDEAVRMAKMVKKPAKPPVLVYHR

Sequence 1 YVYQDKMDIYLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLR
           YV--D----Y-S-------F-----NG-DG-IIWGSS-D-NS--KC----
Sequence 2 YVFTDTLE-YISKENTTAVFKAMKDNGADGVIIWGSSFDLNSKEKCAKFL

Sequence 1 EYLLNTLGPFAVNVTETVNGRSSLNF
           -YL---L-P----V------------
Sequence 2 DYLREVLWPVIDEVKRS---------



Alignment 7
Sequence 1:
Sequence 2: Allergen Ves m 2.0101, Sequence: 6736487
Sequence identity: 4.36 (16/367)
Sequence 1 YVSLSPDSVFNIITDDISHQILSRSNCERSKRPKRVFSIYWNVPTFMCHQ
           ----------------------------R---PK--FSIYWN-PT--CH-
Sequence 2 ---------------------------DRCIWPKEGFSIYWNIPTHFCHN

Sequence 1 YGMNFDEVTDFNIKHNSKDNFRGETISIYYDPGKFPALMPLKNGNYEERN
           -G--F-E-------------------------------------------
Sequence 2 FGVYFKEL------------------------------------------

Sequence 1 GGVPQRGNITIHLQQFNEDLDKMTPDKNFGGIGVIDFERWKPIFRQNWGN
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 TEIHKKYSIELVRKEHPKWSESMIEAEATKKFEKYARYFMEETLKLAKKT
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 RKRAKWGYYGFPYCYNVTPNNPGPDCDAKATIENDRLSWMYNNQEILFPS
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 VYVRHEQKPEERVYLVQGRIKEAVRISNNLEHSPSVLAYWWYVYQDKMDI
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 YLSETDVEKTFQEIVTNGGDGIIIWGSSSDVNSLSKCKRLREYLLNTLGP
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 FAVNVTETVNGRSSLNF
           -----------------
Sequence 2 -----------------


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