The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

SDAP Home Page
SDAP Overview
SDAP All
SDAP Food

Use SDAP All
Search SDAP All
List SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Pyr c 5

Sequence 3243234

Full FASTA alignment

Sequence name:
Query sequence:
MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
DEYLNQFV

NoAllergenSequence Link in
SwissProt/NCBI/PIR
View SequenceSequence
Length
bit scoreE score
1Pyr c 5AAC24001Go!308440.54.0e-125
2Bet v 6.0102AAG22740Go!308367.73.2e-103
3Cor a 6.0101A0A0U1VZC8Go!308361.32.6e-101
4Bet v 6.0101AAC05116Go!300358.71.6e-100
5Dau c 5.0101H2DF86Go!306357.14.7e-100
6Ole e 12.0101E1U332Go!308349.01.3e-97

Alignment made with FASTA 3.45
As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.

Alignment 1
Sequence 1:
Sequence 2: Allergen Pyr c 5, Sequence: AAC24001
Sequence identity: 100.00 (308/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
Sequence 2 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
Sequence 2 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
Sequence 2 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
Sequence 2 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
Sequence 2 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV

Sequence 1 DEYLNQFV
           DEYLNQFV
Sequence 2 DEYLNQFV



Alignment 2
Sequence 1:
Sequence 2: Allergen Bet v 6.0102, Sequence: AAG22740
Sequence identity: 79.55 (245/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E
Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK
Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV
Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK
Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV
Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV

Sequence 1 DEYLNQFV
           -EYL-QFV
Sequence 2 EEYLQQFV



Alignment 3
Sequence 1:
Sequence 2: Allergen Cor a 6.0101, Sequence: A0A0U1VZC8
Sequence identity: 79.22 (244/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-KS-ILFIGGTGYIGKFIVEAS-KAG-PT-VLVRE---SDP-K-K--E
Sequence 2 MAQKSKILFIGGTGYIGKFIVEASLKAGHPTFVLVRESTVSDPVKGKLVE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK--G---V-GDLYDH-SLVKAIK-VDVVISTVGH-QLADQ-KIIAAIK
Sequence 2 KFKSSGATLVHGDLYDHGSLVKAIKHVDVVISTVGHLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPSEFGNDVDR-HAVEPAK-AF-TK--IRR--EAEGIPYTYV
Sequence 2 EAGNVKRFFPSEFGNDVDRVHAVEPAKTAFATKVEIRRKIEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSN-FAGYFLPTL-QPG----PRDKV-I-GDG--KAIFNKEDDIGTYTIR
Sequence 2 SSNYFAGYFLPTLAQPGLTAPPRDKVTIFGDGHVKAIFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNKVLY-RP--N--SFNELV-LWEKKIGKTLE-I---EE--LK
Sequence 2 AVDDPRTLNKVLYLRPAKNIYSFNELVALWEKKIGKTLEKIHLTEEKILK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-NVILSI-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV
Sequence 2 DIQESPIPINVILSINHSVFVKGDHTNFEIEESFGVEASQLYPDVKYTTV

Sequence 1 DEYLNQFV
           -EYL-QFV
Sequence 2 EEYLQQFV



Alignment 4
Sequence 1:
Sequence 2: Allergen Bet v 6.0101, Sequence: AAC05116
Sequence identity: 77.60 (239/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E
Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK
Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV
Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK
Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV
Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV

Sequence 1 DEYLNQFV
           --------
Sequence 2 --------



Alignment 5
Sequence 1:
Sequence 2: Allergen Dau c 5.0101, Sequence: H2DF86
Sequence identity: 77.27 (238/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-K--IL--GGTGYIGKFIVEASAKAG-PT-VLVREA-L--P-KS--I-
Sequence 2 MATK--ILIVGGTGYIGKFIVEASAKAGHPTFVLVREATLTSPDKSQLID

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV-FV-GDLYDH-SLVKAIKQVDVVIST-GHGQLADQ-K--AAI-
Sequence 2 SFKSLGVTFVHGDLYDHGSLVKAIKQVDVVISTLGHGQLADQDKLLAAIV

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPSEFG-DVDR--AVEPAKSAF--KA--RR-VEA-G-P-TYV
Sequence 2 EAGNVKRFFPSEFGQDVDRVNAVEPAKSAFAAKAQFRRTVEAAGVPFTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           ---FFAGYFLPTL-Q-GA---PRDK-VILGDG-PK--FNKE-DI-TYTI-
Sequence 2 ACDFFAGYFLPTLAQAGAAAPPRDKAVILGDGIPKVAFNKEEDIATYTIK

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK-LY-RPP-NT-SFNEL-S-WEKKIGKTLE-IYVPEEQ-LK
Sequence 2 AVDDPRTLNKILYVRPPHNTLSFNELLSVWEKKIGKTLEKIYVPEEQVLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE--VP-NV-LSISH--FVKGD-T-FE-EPSFGVEA-ALYPDVKYTTV
Sequence 2 SIQESPVPINVLLSISHSAFVKGDQTSFEVEPSFGVEASALYPDVKYTTV

Sequence 1 DEYLNQFV
           DEYL-QFV
Sequence 2 DEYLSQFV



Alignment 6
Sequence 1:
Sequence 2: Allergen Ole e 12.0101, Sequence: E1U332
Sequence identity: 74.68 (230/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-K--IL-IGGTGYIGKFIVEASAK---PT--L-RE---SDP-K-K-I-
Sequence 2 MADKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQ

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK--GV----GDLYDHESLVKAIKQVDVVISTVG--QLADQ-KIIAAIK
Sequence 2 GFKNSGVTILTGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPS-FG-DVDR-HAVEPAKS-FE-K--IRRA-EAEGIPYT-V
Sequence 2 EAGNVKRFFPSDFGTDVDRCHAVEPAKSSFEIKSQIRRAIEAEGIPYTFV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           S-N-FAGY-LPTL-QP-----PRDKV-ILGDGN-KA-FN-E-DIGTYTI-
Sequence 2 SANYFAGYSLPTLVQPEVTAPPRDKVIILGDGNAKAVFNEENDIGTYTIK

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDD-RTLNK-LYI-PP-N--SFNELV-LWEKKIGKTLE-IYVPEEQ-LK
Sequence 2 AVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTLEKIYVPEEQVLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-N----I-H--FVKGD-TNF-IEPSFGVEA--LYPDVKYTTV
Sequence 2 QIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVKYTTV

Sequence 1 DEYLNQFV
           -EYL-QFV
Sequence 2 EEYLDQFV


SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | Toolbox | News | Employment | Sitemap 
UT System | Reports to the State | Compact With Texans | Statewide Search
 
This site published by Ovidiu Ivanciuc
Copyright   2001-2013  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.