The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

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SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: February 25, 2013  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Pyr c 5

Sequence 3243234

Full FASTA alignment

Sequence name:
Query sequence:
MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
DEYLNQFV

NoAllergenSequence Link in
SwissProt/NCBI/PIR
View SequenceSequence
Length
bit scoreE score
1Pyr c 5AAC24001Go!308468.61.0e-133
2Bet v 6.0102AAG22740Go!308391.02.4e-110
3Bet v 6.0101AAC05116Go!300381.41.8e-107
4Dau c 5.0101H2DF86Go!306379.85.8e-107

Alignment made with FASTA 3.45
As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.

Alignment 1
Sequence 1:
Sequence 2: Allergen Pyr c 5, Sequence: AAC24001
Sequence identity: 100.00 (308/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
Sequence 2 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
Sequence 2 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
Sequence 2 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
Sequence 2 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
Sequence 2 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV

Sequence 1 DEYLNQFV
           DEYLNQFV
Sequence 2 DEYLNQFV



Alignment 2
Sequence 1:
Sequence 2: Allergen Bet v 6.0102, Sequence: AAG22740
Sequence identity: 79.55 (245/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E
Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK
Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV
Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK
Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV
Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV

Sequence 1 DEYLNQFV
           -EYL-QFV
Sequence 2 EEYLQQFV



Alignment 3
Sequence 1:
Sequence 2: Allergen Bet v 6.0101, Sequence: AAC05116
Sequence identity: 77.60 (239/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E
Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK
Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV
Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR
Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK
Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV
Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV

Sequence 1 DEYLNQFV
           --------
Sequence 2 --------



Alignment 4
Sequence 1:
Sequence 2: Allergen Dau c 5.0101, Sequence: H2DF86
Sequence identity: 77.27 (238/308)
Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
           MA-K--IL--GGTGYIGKFIVEASAKAG-PT-VLVREA-L--P-KS--I-
Sequence 2 MATK--ILIVGGTGYIGKFIVEASAKAGHPTFVLVREATLTSPDKSQLID

Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
           -FK-LGV-FV-GDLYDH-SLVKAIKQVDVVIST-GHGQLADQ-K--AAI-
Sequence 2 SFKSLGVTFVHGDLYDHGSLVKAIKQVDVVISTLGHGQLADQDKLLAAIV

Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
           EAGNVKRFFPSEFG-DVDR--AVEPAKSAF--KA--RR-VEA-G-P-TYV
Sequence 2 EAGNVKRFFPSEFGQDVDRVNAVEPAKSAFAAKAQFRRTVEAAGVPFTYV

Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
           ---FFAGYFLPTL-Q-GA---PRDK-VILGDG-PK--FNKE-DI-TYTI-
Sequence 2 ACDFFAGYFLPTLAQAGAAAPPRDKAVILGDGIPKVAFNKEEDIATYTIK

Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
           AVDDPRTLNK-LY-RPP-NT-SFNEL-S-WEKKIGKTLE-IYVPEEQ-LK
Sequence 2 AVDDPRTLNKILYVRPPHNTLSFNELLSVWEKKIGKTLEKIYVPEEQVLK

Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
           -IQE--VP-NV-LSISH--FVKGD-T-FE-EPSFGVEA-ALYPDVKYTTV
Sequence 2 SIQESPVPINVLLSISHSAFVKGDQTSFEVEPSFGVEASALYPDVKYTTV

Sequence 1 DEYLNQFV
           DEYL-QFV
Sequence 2 DEYLSQFV


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