SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV DEYLNQFV
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Pyr c 5, Sequence: AAC24001 Sequence identity: 100.00 (308/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE Sequence 2 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK Sequence 2 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV Sequence 2 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR Sequence 2 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK Sequence 2 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV Sequence 2 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV
Sequence 1 DEYLNQFV DEYLNQFV Sequence 2 DEYLNQFV
Alignment 2 Sequence 1: Sequence 2: Allergen Bet v 6.0102, Sequence: AAG22740 Sequence identity: 79.55 (245/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV
Sequence 1 DEYLNQFV -EYL-QFV Sequence 2 EEYLQQFV
Alignment 3 Sequence 1: Sequence 2: Allergen Cor a 6.0101, Sequence: A0A0U1VZC8 Sequence identity: 79.22 (244/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MA-KS-ILFIGGTGYIGKFIVEAS-KAG-PT-VLVRE---SDP-K-K--E Sequence 2 MAQKSKILFIGGTGYIGKFIVEASLKAGHPTFVLVRESTVSDPVKGKLVE
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK -FK--G---V-GDLYDH-SLVKAIK-VDVVISTVGH-QLADQ-KIIAAIK Sequence 2 KFKSSGATLVHGDLYDHGSLVKAIKHVDVVISTVGHLQLADQVKIIAAIK
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGNVKRFFPSEFGNDVDR-HAVEPAK-AF-TK--IRR--EAEGIPYTYV Sequence 2 EAGNVKRFFPSEFGNDVDRVHAVEPAKTAFATKVEIRRKIEAEGIPYTYV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR SSN-FAGYFLPTL-QPG----PRDKV-I-GDG--KAIFNKEDDIGTYTIR Sequence 2 SSNYFAGYFLPTLAQPGLTAPPRDKVTIFGDGHVKAIFNKEDDIGTYTIR
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDDPRTLNKVLY-RP--N--SFNELV-LWEKKIGKTLE-I---EE--LK Sequence 2 AVDDPRTLNKVLYLRPAKNIYSFNELVALWEKKIGKTLEKIHLTEEKILK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV -IQE---P-NVILSI-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV Sequence 2 DIQESPIPINVILSINHSVFVKGDHTNFEIEESFGVEASQLYPDVKYTTV
Sequence 1 DEYLNQFV -EYL-QFV Sequence 2 EEYLQQFV
Alignment 4 Sequence 1: Sequence 2: Allergen Bet v 6.0101, Sequence: AAC05116 Sequence identity: 77.60 (239/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MA-KS-IL-IGGTGYIGKFIVEASAK-G-PT--LVRE---SDP-K-K--E Sequence 2 MAHKSKILIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVE
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK -FK-LGV----GDLYDHESLVKA-KQVDVVISTVGH-QLADQ-KIIAAIK Sequence 2 KFKGLGVTLLHGDLYDHESLVKAFKQVDVVISTVGHLQLADQVKIIAAIK
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGN-KRFFPSEFGNDVDR-HAVEPAK-AF-TKA-IRR--EAEGIPYTYV Sequence 2 EAGNIKRFFPSEFGNDVDRVHAVEPAKTAFATKAEIRRKTEAEGIPYTYV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR SSNFFAGYFLPTL-QPG--S-PR-KVVI-GDGN--A-FNKEDDIGTYTIR Sequence 2 SSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARAVFNKEDDIGTYTIR
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDDPRTLNK--YI-P--N--SFNE-V-LWEKKIGKTLE-IYVPEE-LLK Sequence 2 AVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEEKLLK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV -IQE---P-NVIL-I-H-VFVKGDHTNFEIE-SFGVEA--LYPDVKYTTV Sequence 2 DIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPDVKYTTV
Sequence 1 DEYLNQFV -------- Sequence 2 --------
Alignment 5 Sequence 1: Sequence 2: Allergen Dau c 5.0101, Sequence: H2DF86 Sequence identity: 77.27 (238/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MA-K--IL--GGTGYIGKFIVEASAKAG-PT-VLVREA-L--P-KS--I- Sequence 2 MATK--ILIVGGTGYIGKFIVEASAKAGHPTFVLVREATLTSPDKSQLID
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK -FK-LGV-FV-GDLYDH-SLVKAIKQVDVVIST-GHGQLADQ-K--AAI- Sequence 2 SFKSLGVTFVHGDLYDHGSLVKAIKQVDVVISTLGHGQLADQDKLLAAIV
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGNVKRFFPSEFG-DVDR--AVEPAKSAF--KA--RR-VEA-G-P-TYV Sequence 2 EAGNVKRFFPSEFGQDVDRVNAVEPAKSAFAAKAQFRRTVEAAGVPFTYV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR ---FFAGYFLPTL-Q-GA---PRDK-VILGDG-PK--FNKE-DI-TYTI- Sequence 2 ACDFFAGYFLPTLAQAGAAAPPRDKAVILGDGIPKVAFNKEEDIATYTIK
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDDPRTLNK-LY-RPP-NT-SFNEL-S-WEKKIGKTLE-IYVPEEQ-LK Sequence 2 AVDDPRTLNKILYVRPPHNTLSFNELLSVWEKKIGKTLEKIYVPEEQVLK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV -IQE--VP-NV-LSISH--FVKGD-T-FE-EPSFGVEA-ALYPDVKYTTV Sequence 2 SIQESPVPINVLLSISHSAFVKGDQTSFEVEPSFGVEASALYPDVKYTTV
Sequence 1 DEYLNQFV DEYL-QFV Sequence 2 DEYLSQFV
Alignment 6 Sequence 1: Sequence 2: Allergen Ole e 12.0101, Sequence: E1U332 Sequence identity: 74.68 (230/308) Sequence 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIE MA-K--IL-IGGTGYIGKFIVEASAK---PT--L-RE---SDP-K-K-I- Sequence 2 MADKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQ
Sequence 1 NFKALGVNFVLGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIK -FK--GV----GDLYDHESLVKAIKQVDVVISTVG--QLADQ-KIIAAIK Sequence 2 GFKNSGVTILTGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIK
Sequence 1 EAGNVKRFFPSEFGNDVDRSHAVEPAKSAFETKAKIRRAVEAEGIPYTYV EAGNVKRFFPS-FG-DVDR-HAVEPAKS-FE-K--IRRA-EAEGIPYT-V Sequence 2 EAGNVKRFFPSDFGTDVDRCHAVEPAKSSFEIKSQIRRAIEAEGIPYTFV
Sequence 1 SSNFFAGYFLPTLNQPGASSAPRDKVVILGDGNPKAIFNKEDDIGTYTIR S-N-FAGY-LPTL-QP-----PRDKV-ILGDGN-KA-FN-E-DIGTYTI- Sequence 2 SANYFAGYSLPTLVQPEVTAPPRDKVIILGDGNAKAVFNEENDIGTYTIK
Sequence 1 AVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTLERIYVPEEQLLK AVDD-RTLNK-LYI-PP-N--SFNELV-LWEKKIGKTLE-IYVPEEQ-LK Sequence 2 AVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTLEKIYVPEEQVLK
Sequence 1 NIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYTTV -IQE---P-N----I-H--FVKGD-TNF-IEPSFGVEA--LYPDVKYTTV Sequence 2 QIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVKYTTV
Sequence 1 DEYLNQFV -EYL-QFV Sequence 2 EEYLDQFV
|