SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE E
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Hev b 5, Sequence: AAC49447 Sequence identity: 100.00 (151/151) Sequence 1 MASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE MASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE Sequence 2 MASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE
Sequence 1 EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV Sequence 2 EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV
Sequence 1 AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE Sequence 2 AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE
Sequence 1 E E Sequence 2 E
Alignment 2 Sequence 1: Sequence 2: Allergen Hev b 5, Sequence: Q39967 Sequence identity: 99.34 (150/151) Sequence 1 MASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE -ASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE Sequence 2 -ASVEVESAATALPKNETPEVTKAEETKTEEPAAPPASEQETADATPEKE
Sequence 1 EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV Sequence 2 EPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPEADQTTPEEKPAEPEPV
Sequence 1 AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE Sequence 2 AEEEPKHETKETETEAPAAPAEGEKPAEEEKPITEAAETATTEVPVEKTE
Sequence 1 E E Sequence 2 E
Alignment 3 Sequence 1: Sequence 2: Allergen Act d a, Sequence: AAA53071 Sequence identity: 53.64 (81/151) Sequence 1 MASVEVESAATALPKNETP-EVTKAEETKTEEPAAPPASEQETADATPEK MA-VEV--A-TALP-NET--EVTK--E---E---A-P----E-----PEK Sequence 2 MATVEVTPAVTALPENETADEVTKPQEPQPEAAVAAPPAPAEPVTEEPEK
Sequence 1 EEPTA--APAEPEA-----PA----------------PETEKAE----EV --P-A--AP-EP-A-----PA----------------PE---AE----EV Sequence 2 AAPEAVEAPEEPAATDAKDPAEVAEAEEEVVEEPQEVPEEPVAEAAAKEV
Sequence 1 EKIEKTEEPAPEADQTTPEEKPAEPEPVAEEEPKHETK-----ETETEAP E--E---EP--E----TPE---A---P-A-EEP----------E--T-AP Sequence 2 EATEGKAEPTGEMKDKTPEATDAPEAPAAAEEPTDAPEAPAVAEEPTNAP
Sequence 1 AAPAEGEKP-AEEEKPITEAAETATTEVPVEKTEE -APA-GE-P-A-E-KP--EA-E-A-TEVPV-KTEE Sequence 2 EAPAVGEEPEAKEGKP-DEAVEEASTEVPVDKTEE
Alignment 4 Sequence 1: Sequence 2: Allergen Pru ar 5.0101, Sequence: Q9XF96 Sequence identity: 56.95 (86/151) Sequence 1 MASVEVESAATALPKNE--TPEVTKAEETKTEEP-AAPPASEQETADAT- MA-VEV--AAT-L--NE--T-EV-K-EE---EEP-AA-PA---E---AT- Sequence 2 MATVEVAPAAT-LQENEAKTVEVIKTEEKTPEEPVAAAPAAVPESEAATT
Sequence 1 --PEKEEPTAAPAEPEAPAPETEKAE-----EVEKIEKTEEP-APEADQT --P----P--A-AE-EA-AP----AE-----EVE--E--EEP-A-EA--- Sequence 2 EEPKETTPVEAEAEAEAEAPAAPEAETPVPAEVETKEVAEEPKAAEAEAE
Sequence 1 TPE------------EKPAE---PEPVAE--EEPKHETKETETEAPAAPA -P-------------E-P-E----EPVA---EE-K-ET-E---E-PAAP- Sequence 2 EPAATETEKTEKTEAEEPKEVTAAEPVAAVAEETKEETTES-AETPAAP-
Sequence 1 EGEKPAEEEKPITEAAETATTEVPVEKTEE ----PAEEEK-----AE-ATT-VPVEKTEE Sequence 2 ----PAEEEK-----AEEATTDVPVEKTEE
|