The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

SDAP Home Page
SDAP Overview
SDAP All
SDAP Food

Use SDAP All
Search SDAP All
List SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: Nov 1, 2021  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Bet v 3

Sequence P43187

Full FASTA alignment

Sequence name:
Query sequence:
MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
LVRSS

NoAllergenSequence Link in
SwissProt/NCBI/PIR
View SequenceSequence
Length
bit scoreE score
1Bet v 3P43187Go!205200.33.5e-53
2Der f 39.0101QBF67841Go!15334.02.9e-03
3Syr v 3P58171Go!8132.74.0e-03
4Bla g 6.0101ABB89296Go!15133.34.7e-03
5Der p 39.0101QXY82447Go!15333.34.7e-03
6Bra r 5.0101P69197Go!7932.25.3e-03
7Che a 3AAL92871Go!8631.87.4e-03
8Tyr p 34.0101D2DGW3Go!15332.39.5e-03
9Tyr p 24.0101ACL36923Go!15332.39.5e-03

Alignment made with FASTA 3.45
As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.

Alignment 1
Sequence 1:
Sequence 2: Allergen Bet v 3, Sequence: P43187
Sequence identity: 100.00 (205/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
Sequence 2 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
Sequence 2 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
Sequence 2 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
Sequence 2 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV

Sequence 1 LVRSS
           LVRSS
Sequence 2 LVRSS



Alignment 2
Sequence 1:
Sequence 2: Allergen Der f 39.0101, Sequence: QBF67841
Sequence identity: 21.46 (44/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           ----------------------------------------LR--FD-FD-
Sequence 2 ---------------------------MSVEELTKEQVQMLRKAFDMFDR

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           ---G-I-----S--L--LG-------L----------G---L-F--F--L
Sequence 2 EKKGHIHTNMVSTILRTLGQTFEEKDLQQLITEIDADGSGELEFDEFLTL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           --------F----ED-----E--R--------------F---D--G-GYI
Sequence 2 -----TARFLVE-EDAEAMQEELREA------------FRMYDKEGNGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           ----L---L--L--------D----MI---D----G-VDF-EF--MM---
Sequence 2 PTSALREILRAL--DDKLTNDELDEMIAEIDTDGSGTVDFDEFMEMMTGD

Sequence 1 LVRSS
           -----
Sequence 2 -----



Alignment 3
Sequence 1:
Sequence 2: Allergen Syr v 3, Sequence: P58171
Sequence identity: 14.15 (29/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           ------------------------------E-A-----FK-FD--GDG-I
Sequence 2 ---------------------------MAEEVAELERIFKRFDANGDGKI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           S--EL---L--LG-----EI-R---M----D---DG---F-EFKD--R--
Sequence 2 SSSELGETLKTLGSVTPEEIQR---MMAEIDTDGDGFISFEEFKDFARAN

Sequence 1 LVRSS------
           -----------
Sequence 2 SGLIKDVAKIF



Alignment 4
Sequence 1:
Sequence 2: Allergen Bla g 6.0101, Sequence: ABB89296
Sequence identity: 21.46 (44/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           ----------------------------------------L---FD-FD-
Sequence 2 -----------------------------MDELPPEQIQLLKKAFDAFDR

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           ---G-I--------L--LG---D---L----------G---L-FE-F-SL
Sequence 2 EKKGCISTEMVGTILEMLGHRLDDDMLQEIIAEVDADGSGELEFEEFVSL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           ------S-F----ED--------R--------------F---D--G-GYI
Sequence 2 A-----SRFLVE-EDAEAMQQELREA------------FRLYDKEGNGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           ----L---L--L-------------MI---DS---G-VDF-EF---M---
Sequence 2 TTNVLREILKEL--DDKITAEDLDMMIEEIDSDGSGTVDFDEFMEVMTGE

Sequence 1 LVRSS
           -----
Sequence 2 -----



Alignment 5
Sequence 1:
Sequence 2: Allergen Der p 39.0101, Sequence: QXY82447
Sequence identity: 21.46 (44/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           ----------------------------------------LR--FD-FD-
Sequence 2 ---------------------------MSVEELTKEQVQMLRKAFDMFDR

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           ---G-I-----S--L--LG-------L----------G---L-F--F--L
Sequence 2 EKKGHIHTNMVSTILRTLGQTFEEKDLQTLITEIDADGSGELEFDEFLTL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           --------F----ED-----E--R--------------F---D--G-GYI
Sequence 2 -----TARFLVE-EDAEAMQEELREA------------FRMYDKEGNGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           ----L---L--L--------D----MI---D----G-VDF-EF--MM---
Sequence 2 PTSALREILRAL--DDKLTNDELDEMIAEIDTDGSGTVDFDEFMEMMTGD

Sequence 1 LVRSS
           -----
Sequence 2 -----



Alignment 6
Sequence 1:
Sequence 2: Allergen Bra r 5.0101, Sequence: P69197
Sequence identity: 13.17 (27/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           --------------------------------A-----FK-FD-DGDG-I
Sequence 2 -----------------------------MADAEHERIFKKFDTDGDGKI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           SA-EL---L-KLG-------D-V--M----D---DG---F-EF-------
Sequence 2 SAAELEEALKKLG---SVTPDDVTRMMAKIDTDGDGNISFQEFTEFASAN

Sequence 1 LVRSS------
           -----------
Sequence 2 PGLMKDVAKVF



Alignment 7
Sequence 1:
Sequence 2: Allergen Che a 3, Sequence: AAL92871
Sequence identity: 14.15 (29/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           --------------------------------------------------
Sequence 2 --------------------------------------------------

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           ----------------------M------Q--AD----FK-FD--GDG-I
Sequence 2 ----------------------MAAEDTPQDIADRERIFKRFDTNGDGKI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           S--EL---L--LG-------D-V--M----D---DG---F-EF-D--R--
Sequence 2 SSSELGDALKTLG---SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN

Sequence 1 LVRSS------
           -----------
Sequence 2 RGLVKDVSKIF



Alignment 8
Sequence 1:
Sequence 2: Allergen Tyr p 34.0101, Sequence: D2DGW3
Sequence identity: 21.95 (45/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           ----------------------------------------LR--FD-FD-
Sequence 2 ---------------------------MSVEELSKEQVQMLRKAFDMFDR

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           ---G-I-----S--L--LG-------L----------G---L-F--F--L
Sequence 2 DKKGYIHTNMVSTILRTLGQTFEENDLQQLIIEIDADGSGELEFDEFLTL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           --------F----ED-----E--R--------------F---D--G-GYI
Sequence 2 -----TARFLVE-EDTEAMQEELREA------------FRMYDKEGNGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           ----L---L--L------E-D----MI---D----G-VDF-EF--MM---
Sequence 2 PTSALREILRALD-DKLTE-DELDEMIAEIDTDGSGTVDFDEFMEMMTGD

Sequence 1 LVRSS
           -----
Sequence 2 -----



Alignment 9
Sequence 1:
Sequence 2: Allergen Tyr p 24.0101, Sequence: ACL36923
Sequence identity: 21.95 (45/205)
Sequence 1 MPCSTEAMEKAGHGHASTPRKRSLSNSSFRLRSESLNTLRLRRIFDLFDK
           ----------------------------------------LR--FD-FD-
Sequence 2 ---------------------------MSVEELSKEQVQMLRKAFDMFDR

Sequence 1 NSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL
           ---G-I-----S--L--LG-------L----------G---L-F--F--L
Sequence 2 DKKGYIHTNMVSTILRTLGQTFEENDLQQLIIEIDADGSGELEFDEFLTL

Sequence 1 HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYI
           --------F----ED-----E--R--------------F---D--G-GYI
Sequence 2 -----TARFLVE-EDTEAMQEELREA------------FRMYDKEGNGYI

Sequence 1 SARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSV
           ----L---L--L------E-D----MI---D----G-VDF-EF--MM---
Sequence 2 PTSALREILRALD-DKLTE-DELDEMIAEIDTDGSGTVDFDEFMEMMTGD

Sequence 1 LVRSS
           -----
Sequence 2 -----


SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | Toolbox | News | Employment | Sitemap 
UT System | Reports to the State | Compact With Texans | Statewide Search
 
This site published by Ovidiu Ivanciuc
Copyright   2001-2013  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.