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SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV RAGVKVAQTARVVCPYGGDTRRGVWPARKST
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Alt a 13.0101, Sequence: Q6R4B4 Sequence identity: 100.00 (231/231) Sequence 1 MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV Sequence 2 MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV
Sequence 1 SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF Sequence 2 SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF
Sequence 1 GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN Sequence 2 GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN
Sequence 1 ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV Sequence 2 ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV
Sequence 1 RAGVKVAQTARVVCPYGGDTRRGVWPARKST RAGVKVAQTARVVCPYGGDTRRGVWPARKST Sequence 2 RAGVKVAQTARVVCPYGGDTRRGVWPARKST
Alignment 2 Sequence 1: Sequence 2: Allergen Per a 5.0102, Sequence: AEV23867 Sequence identity: 14.72 (34/231) Sequence 1 MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV -------------------G-A---------------L------------ Sequence 2 ----------MTIDFYYLPGSAPCRSVLLAAKAIGVDLNLKVTNLMAGEH
Sequence 1 SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF --P-F---NP----P--------G------WES---L-Y-AD-Y-KD--- Sequence 2 LTPEFLKMNPQHTIPTL---NDNG---FCLWESRAILSYLADQYGKDDSL
Sequence 1 GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN --------------L------L--------Y-Y-----K-----EK---- Sequence 2 YPKDAKKRALVDQRLYFDIGTL--YHRFGEYYYPIYFAKQAADPEKMKK-
Sequence 1 ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV -------L---L----Q---A-----------------A----------- Sequence 2 LEEAFEFLNKFLE--SQEFVAGNKLTIADLAIVSSVSTADIMGFDVSKYS
Sequence 1 RAGVKVAQTARVVCPYGGDTRRGVWPARKST------ ------------V--Y------G-------------- Sequence 2 NVAKWFEKCKKIVPGYEELNHSGCLKFKEMCDNLAKK
Alignment 3 Sequence 1: Sequence 2: Allergen Per a 5.0101, Sequence: AUW37958 Sequence identity: 14.72 (34/231) Sequence 1 MSDKPSELAVQKLVLFAVKGTATSTHNTVRPLILLDELGVPHEIYVVDRV -------------------G-A---------------L------------ Sequence 2 ----------MTIDFYYLPGSAPCRSVLLAAKAIGVDLNLKVTNLMAGEH
Sequence 1 SAPWFTEINPHRMVPVILEKSPDGRDTLRAWESTSTLMYIADAYDKDGTF --P-F---NP----P--------G------WES---L-Y-AD-Y-KD--- Sequence 2 LTPEFLKMNPQHTIPTL---NDNG---FCLWESRAILSYLADQYGKDDSL
Sequence 1 GGRNVQESSDINNWLTLHTAALGPTAKYWLYFYKLHPEKLPKTIEKLRSN --------------L------L--------Y-Y-----K-----EK---- Sequence 2 YPKDAKKRALVDQRLYFDIRTL--YHRFGEYYYPIYFAKQAADPEKMKK-
Sequence 1 ITVQYDILERRLNEPGQQYLAWLNEKFKRSSYNRRHCYASLCYEKYRRVV -------L---L----Q---A-----------------A----------- Sequence 2 LEEAFEFLNKFLE--SQEFVAGNKLTIADLAIVSSVSTADIMGFDVSKYS
Sequence 1 RAGVKVAQTARVVCPYGGDTRRGVWPARKST------ ------------V--Y------G-------------- Sequence 2 NVAKWFEKCKKIVPGYEELNHSGCLKFKEMCDNLAKK
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