SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS IPPLIKKY
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Phl p 4.0201, Sequence: CAD54671 Sequence identity: 100.00 (508/508) Sequence 1 SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN Sequence 2 SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN
Sequence 1 SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS Sequence 2 SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS
Sequence 1 YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT Sequence 2 YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT
Sequence 1 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD Sequence 2 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD
Sequence 1 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA Sequence 2 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA
Sequence 1 VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF Sequence 2 VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF
Sequence 1 PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD Sequence 2 PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD
Sequence 1 YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK Sequence 2 YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK
Sequence 1 GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI Sequence 2 GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI
Sequence 1 DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS Sequence 2 DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS
Sequence 1 IPPLIKKY IPPLIKKY Sequence 2 IPPLIKKY
Alignment 2 Sequence 1: Sequence 2: Allergen Phl p 4.0101, Sequence: CAD54670 Sequence identity: 91.34 (464/508) Sequence 1 SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN SSC-VA-SY-P-P-AKEDFL-CLVKEIPPRLLYAKSSPAYPSVLGQTIRN Sequence 2 SSCEVALSYYPTPLAKEDFLRCLVKEIPPRLLYAKSSPAYPSVLGQTIRN
Sequence 1 SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS SRWSSPDNVKP-YI-TPTN-SHIQSAVVCGRRH-VRIRVRSGGHDYEGLS Sequence 2 SRWSSPDNVKPIYIVTPTNASHIQSAVVCGRRHGVRIRVRSGGHDYEGLS
Sequence 1 YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT YRSLQPE-FAVVDL-KMRAVWVDGKARTAWVDSGAQLGELYYAI-KASP- Sequence 2 YRSLQPEEFAVVDLSKMRAVWVDGKARTAWVDSGAQLGELYYAIHKASPV
Sequence 1 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANG-LHD Sequence 2 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGTLHD
Sequence 1 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA KKSMGDDHFWAVRGGGGESFGIVVAW-V-LLPVPPTVT-FKI-K--SEGA Sequence 2 KKSMGDDHFWAVRGGGGESFGIVVAWKVRLLPVPPTVTVFKIPKKASEGA
Sequence 1 VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF VDIIN-WQVVAPQLP-DLMIR-IAQGP-ATFEAMYLGTC-TLTP-MSSKF Sequence 2 VDIINRWQVVAPQLPDDLMIRVIAQGPTATFEAMYLGTCQTLTPMMSSKF
Sequence 1 PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD PELGMN-SHCNEMSWIQSIPFVHLGHRD--EDDLLNRNN-FKPFAEYKSD Sequence 2 PELGMNASHCNEMSWIQSIPFVHLGHRDNIEDDLLNRNNTFKPFAEYKSD
Sequence 1 YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK YVY-PFPK-VWEQI--TWL-KPGAGIMIFDPYGATISATPE-ATPFPHRK Sequence 2 YVYEPFPKEVWEQIFSTWLLKPGAGIMIFDPYGATISATPEWATPFPHRK
Sequence 1 GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI GVLFNIQYVNYWFAPGA-AAPLSWSK-IYNYMEPYVSKNPRQAYANYRDI Sequence 2 GVLFNIQYVNYWFAPGAGAAPLSWSKEIYNYMEPYVSKNPRQAYANYRDI
Sequence 1 DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS DLGRNEVVNDVST--SG-VWGQKYFKGNF-RLAITKGKVDPTDYFRNEQS Sequence 2 DLGRNEVVNDVSTFSSGLVWGQKYFKGNFQRLAITKGKVDPTDYFRNEQS
Sequence 1 IPPLIKKY IPPLI-KY Sequence 2 IPPLIQKY
Alignment 3 Sequence 1: Sequence 2: Allergen Lol p 4.0101, Sequence: CAH92637 Sequence identity: 77.36 (393/508) Sequence 1 SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS -------------------------AVVCGRR--VRIRVRSGGHDYEGLS Sequence 2 -------------------------AVVCGRRYDVRIRVRSGGHDYEGLS
Sequence 1 YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT YRSLQPE-FAVVDLN-MRAV-VDGKARTAWVDSGAQLGELYYAI-K-S-T Sequence 2 YRSLQPENFAVVDLNQMRAVLVDGKARTAWVDSGAQLGELYYAISKYSRT
Sequence 1 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD LAFPAGVCPTIGVGGN-AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD Sequence 2 LAFPAGVCPTIGVGGNLAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD
Sequence 1 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA KKSMGDDHFWAVRGGGGESFGIVV-WQVKLLPVPPTVTIFKI-K-VSEGA Sequence 2 KKSMGDDHFWAVRGGGGESFGIVVSWQVKLLPVPPTVTIFKIPKSVSEGA
Sequence 1 VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF VDIINKWQ-VAPQLPADLMIRIIA-GPKATFEAMYLGTCKTLTP-M-SKF Sequence 2 VDIINKWQLVAPQLPADLMIRIIAMGPKATFEAMYLGTCKTLTPMMQSKF
Sequence 1 PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD PELGMN-SHCNEMSWI-SIPFVHLGHRD-LE-DLLNRNN-FKPFAEYKSD Sequence 2 PELGMNASHCNEMSWIESIPFVHLGHRDSLEGDLLNRNNTFKPFAEYKSD
Sequence 1 YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK YVY-PFPK-VWEQI--TWLVKPGAGIMIFDPYGATISATPE-ATPFPHRK Sequence 2 YVYEPFPKSVWEQIFGTWLVKPGAGIMIFDPYGATISATPEAATPFPHRK
Sequence 1 GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI GVLFNIQYVNYWFAPGA-AAPLSWSK-IYNYMEPYVSKNPRQAYANYRDI Sequence 2 GVLFNIQYVNYWFAPGAGAAPLSWSKEIYNYMEPYVSKNPRQAYANYRDI
Sequence 1 DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS DLGRNEVVN-VSTY-SGKVWGQKYFKGNFERLAITKGKVDPTDYFRNE-- Sequence 2 DLGRNEVVNGVSTYSSGKVWGQKYFKGNFERLAITKGKVDPTDYFRNE--
Sequence 1 IPPLIKKY -------- Sequence 2 --------
Alignment 4 Sequence 1: Sequence 2: Allergen Dac g 4, Sequence: P82946 Sequence identity: 3.35 (17/508) Sequence 1 SSCQVAFSYFPPPAAKEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRN -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 SRWSSPDNVKPLYIITPTNVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLS -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 YRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT -----------V-------------ARTAWVDSGAQLGEL-Y-------- Sequence 2 --DIYNYMEPYVSKVDPTDYFGNEQARTAWVDSGAQLGELSYGVLFNIQY
Sequence 1 LAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHD -------------------------------------------------- Sequence 2 VNYWFAP-------------------------------------------
Sequence 1 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 VDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKF -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 PELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRNNSFKPFAEYKSD -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 YVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRK -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 GVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDI -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 DLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQS -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 IPPLIKKY -------- Sequence 2 --------
|