The University of Texas Medical Branch
Department of Biochemistry and Molecular Biology Sealy Center for Structural Biology Computational Biology

SDAP Home Page
SDAP Overview
SDAP All
SDAP Food

Use SDAP All
Search SDAP All
List SDAP All
SDAP Food

SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP

About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board

Allergy Links

Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch

Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR

Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST

Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR

Bioinformatics Tools
Cn3D
MolMol

Bioinformatics Links
Bioinformatics Links Directory

SDAP - All Allergens
Go to: SDAP All allergens       Go to: SDAP Food allergens
Send a comment to Ovidiu Ivanciuc      Submit new allergen information to SDAP
Last Updated: February 25, 2013  
Alphabetical listing of allergens: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Access to SDAP is available free of charge for Academic and non-profit use.
Licenses for commercial use can be obtained by contacting W. Braun (webraun@utmb.edu).
Secure access to SDAP is available from https://fermi.utmb.edu/SDAP

Allergen Sal k 3.0101

Sequence 225810599

Full FASTA alignment

Sequence name:
Query sequence:
MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMA
DAGIKYIPSNTFAYYDQVLDTTAMLGAVPARYGFNGGEIGFDLYFSMARG
NASLPAMEMTKWFDTNYHYIVPELGPEVKFAYSSHKAVDEYKEAKALGVD
TVPVLVGPVSYLLLSKAAKGVEKSFPLLSLLPKILPVYKEVIAELKAAGA
STIQFDEPTLVMDLESHQLKAFTDAYADLESTLSGLNVLVETYFADLTPE
AYKTLVSLNGVTAFGFDLVRGTKTLDLIKSGFPSGKYLFAGVVDGRNIWA
NDLAASLATLQSLESIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSW
LAFAAQKVLEVNALAKALAGQKDEAFFSANAAALASRKSSPRVTNEAVQK
AAAGLKGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVR
REYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYF
GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT
SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIEDEAEDLEKAGIN
VIQIDEAALREGLPLRKSGHGFYLQWAVHSFRITNVGIQDTTQIHTHMCY
SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI
HSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYNEVNPALSNM
VYAAKPI

NoAllergenSequence Link in
SwissProt/NCBI/PIR
View SequenceSequence
Length
bit scoreE score
1Sal k 3.0101ACO34814Go!7571096.30.0e+00

Alignment made with FASTA 3.45
As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.

Alignment 1
Sequence 1:
Sequence 2: Allergen Sal k 3.0101, Sequence: ACO34814
Sequence identity: 100.00 (757/757)
Sequence 1 MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMA
           MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMA
Sequence 2 MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMA

Sequence 1 DAGIKYIPSNTFAYYDQVLDTTAMLGAVPARYGFNGGEIGFDLYFSMARG
           DAGIKYIPSNTFAYYDQVLDTTAMLGAVPARYGFNGGEIGFDLYFSMARG
Sequence 2 DAGIKYIPSNTFAYYDQVLDTTAMLGAVPARYGFNGGEIGFDLYFSMARG

Sequence 1 NASLPAMEMTKWFDTNYHYIVPELGPEVKFAYSSHKAVDEYKEAKALGVD
           NASLPAMEMTKWFDTNYHYIVPELGPEVKFAYSSHKAVDEYKEAKALGVD
Sequence 2 NASLPAMEMTKWFDTNYHYIVPELGPEVKFAYSSHKAVDEYKEAKALGVD

Sequence 1 TVPVLVGPVSYLLLSKAAKGVEKSFPLLSLLPKILPVYKEVIAELKAAGA
           TVPVLVGPVSYLLLSKAAKGVEKSFPLLSLLPKILPVYKEVIAELKAAGA
Sequence 2 TVPVLVGPVSYLLLSKAAKGVEKSFPLLSLLPKILPVYKEVIAELKAAGA

Sequence 1 STIQFDEPTLVMDLESHQLKAFTDAYADLESTLSGLNVLVETYFADLTPE
           STIQFDEPTLVMDLESHQLKAFTDAYADLESTLSGLNVLVETYFADLTPE
Sequence 2 STIQFDEPTLVMDLESHQLKAFTDAYADLESTLSGLNVLVETYFADLTPE

Sequence 1 AYKTLVSLNGVTAFGFDLVRGTKTLDLIKSGFPSGKYLFAGVVDGRNIWA
           AYKTLVSLNGVTAFGFDLVRGTKTLDLIKSGFPSGKYLFAGVVDGRNIWA
Sequence 2 AYKTLVSLNGVTAFGFDLVRGTKTLDLIKSGFPSGKYLFAGVVDGRNIWA

Sequence 1 NDLAASLATLQSLESIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSW
           NDLAASLATLQSLESIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSW
Sequence 2 NDLAASLATLQSLESIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSW

Sequence 1 LAFAAQKVLEVNALAKALAGQKDEAFFSANAAALASRKSSPRVTNEAVQK
           LAFAAQKVLEVNALAKALAGQKDEAFFSANAAALASRKSSPRVTNEAVQK
Sequence 2 LAFAAQKVLEVNALAKALAGQKDEAFFSANAAALASRKSSPRVTNEAVQK

Sequence 1 AAAGLKGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVR
           AAAGLKGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVR
Sequence 2 AAAGLKGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVR

Sequence 1 REYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYF
           REYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYF
Sequence 2 REYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYF

Sequence 1 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT
           GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT
Sequence 2 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT

Sequence 1 SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIEDEAEDLEKAGIN
           SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIEDEAEDLEKAGIN
Sequence 2 SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIEDEAEDLEKAGIN

Sequence 1 VIQIDEAALREGLPLRKSGHGFYLQWAVHSFRITNVGIQDTTQIHTHMCY
           VIQIDEAALREGLPLRKSGHGFYLQWAVHSFRITNVGIQDTTQIHTHMCY
Sequence 2 VIQIDEAALREGLPLRKSGHGFYLQWAVHSFRITNVGIQDTTQIHTHMCY

Sequence 1 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI
           SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI
Sequence 2 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI

Sequence 1 HSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYNEVNPALSNM
           HSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYNEVNPALSNM
Sequence 2 HSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYNEVNPALSNM

Sequence 1 VYAAKPI
           VYAAKPI
Sequence 2 VYAAKPI


SDAP Home Page | Search SDAP | SDAP Manual | SDAP FAQ | Contact  
UTMB | Search | Directories | Toolbox | News | Employment | Sitemap 
UT System | Reports to the State | Compact With Texans | Statewide Search
 
This site published by Ovidiu Ivanciuc
Copyright   2001-2013  The University of Texas Medical Branch. Please review our privacy policy and Internet guidelines.