SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: FNAGGHINHSLFWQNLAPASSNEAK
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Alt a 14.0101, Sequence: P86254 Sequence identity: 100.00 (25/25) Sequence 1 FNAGGHINHSLFWQNLAPASSNEAK FNAGGHINHSLFWQNLAPASSNEAK Sequence 2 FNAGGHINHSLFWQNLAPASSNEAK
Alignment 2 Sequence 1: Sequence 2: Allergen Asp f 6, Sequence: Q92450 Sequence identity: 72.00 (18/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MSQQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKK
Sequence 1 ------------------FNAGGHINHSLFWQNLAPASSNEAK------- ------------------FN-GGHINHSLFW-NLAP--S---K------- Sequence 2 AAEATDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKSGGGKIDQAPVL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQ
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 DPVTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRYIAG
Sequence 1 ---------- ---------- Sequence 2 DKGGHPFMKL
Alignment 3 Sequence 1: Sequence 2: Allergen Asp f 6, Sequence: AAB60779 Sequence identity: 72.00 (18/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GTSPIQTPINTMSQQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVN
Sequence 1 -----------------------------FNAGGHINHSLFWQNLAPASS -----------------------------FN-GGHINHSLFW-NLAP--S Sequence 2 GLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKS
Sequence 1 NEAK---------------------------------------------- ---K---------------------------------------------- Sequence 2 GGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GKLDITTTHDQDPVTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIWNVIN
Sequence 1 --------------------- --------------------- Sequence 2 WAEAENRYIAGDKGGHPFMKL
Alignment 4 Sequence 1: Sequence 2: Allergen Pis v 4.0101, Sequence: EF470980 Sequence identity: 60.00 (15/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MALLSYVTRKTLTESLRLGLKSHVRGLQTFTLPDLPYEYGALEPAISSEI
Sequence 1 -------------------------------------------FNAGGHI -------------------------------------------FN-GGHI Sequence 2 MQLHHQKHHQTYITNYNKALEQLDQAINKGDASAVVKLQSAIKFNGGGHI
Sequence 1 NHSLFWQNLAPASSNEAK-------------------------------- NHS-FW-NL-P-S------------------------------------- Sequence 2 NHSIFWKNLTPVSEGGGEPPHGSLGWAIDTNFGSMEALIQRMNAEGAALQ
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 GSGWVWLGLDKESKKLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQ
Sequence 1 ------------------------------ ------------------------------ Sequence 2 YKNVRPDYLKNIWKVINWKYAGELYQKECP
Alignment 5 Sequence 1: Sequence 2: Allergen Hev b 10.0103, Sequence: CAC13961 Sequence identity: 56.00 (14/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 QTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAI
Sequence 1 ----------------FNAGGHINHSLFWQNLAPASSNEAK--------- ----------------FN-GGH-NHS-FW-NLAP---------------- Sequence 2 EKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHGSLGWA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IDADFGSLEKLIQLMNAEGAALRGSGWVWLALDKELKKLVVETTANQDPL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAK
Sequence 1 ----- ----- Sequence 2 ECPSS
Alignment 6 Sequence 1: Sequence 2: Allergen Hev b 10.0102, Sequence: CAB53458 Sequence identity: 56.00 (14/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 QTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAI
Sequence 1 ----------------FNAGGHINHSLFWQNLAPASSNEAK--------- ----------------FN-GGH-NHS-FW-NLAP---------------- Sequence 2 EKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHGSLGWA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IDADFGSLEKLIQLMNAEGVALQGSGWVWLALDKELKKLVVETTANQDPL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAK
Sequence 1 ----- ----- Sequence 2 ECPSS
Alignment 7 Sequence 1: Sequence 2: Allergen Hev b 10.0101, Sequence: AAA16792 Sequence identity: 56.00 (14/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MALRSLVTRKNLPSAFKAATGLGQLRGLQTFSLPDLPYDYGALEPAISGE
Sequence 1 --------------------------------------------FNAGGH --------------------------------------------FN-GGH Sequence 2 IMQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGH
Sequence 1 INHSLFWQNLAPASSNEAK------------------------------- -NHS-FW-NLAP-------------------------------------- Sequence 2 VNHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAAL
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 QGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYL
Sequence 1 --------------------------------- --------------------------------- Sequence 2 QYKNVRPDYLKNIWKVMNWKYASEVYAKECPSS
Alignment 8 Sequence 1: Sequence 2: Allergen Mala s 11, Sequence: CAD68071 Sequence identity: 52.00 (13/25) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 PFYPIPSALPFPLPIHSLFSRRTRLFRFSRTAARAGTEHTLPPLPYEYNA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LEPFISADIMMVHHGKHHQTYVNNLNASTKAYNDAVQAQDVLKQMELLTA
Sequence 1 --FNAGGHINHSLFWQNLAPASSNEAK----------------------- --FN-GGH-NH-LFW---AP-S---------------------------- Sequence 2 VKFNGGGHVNHALFWKTMAPQSQGGGQLNDGPLKQAIDKEFGDFEKFKAA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FTAKALGIQGSGWCWLGLSKTGSLDLVVAKDQDTLTTHHPIIGWDGWEHA
Sequence 1 ------------------------------------- ------------------------------------- Sequence 2 WYLQYKNDKASYLKQWWNVVNWSEAESRYSEGLKASL
|