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SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MTSAGVAPTALRLLTALLLLLVAAPSHSLPLLTRGRWIVDEATGLRVKLA CVNWVGHLEPGLPEGLNRLPVATVAHTISSLGFNCVRLTYSIHMLTRTSY TNATVAQTFARLNLTEAASGIEHNNPELLDLGHVAAYHHVVAALSEAGVM VILDNHVSKPKWCCAVDDGNGFFGDRYFNPNTWVEGLGLMATYFNNTPNV VAMSLRNELRGNRSTPISWSRHMQWGAATVHKANPKVLVILSGLQFDTDL SFLPVLPVTLPFKEKIVYEGHWYSFGVPWRTGLPNDVCKNETGRFKSNVG FVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALW TMGGSYYYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQD PYLAPGPYYQIIYHPASGLCVESGIGNTVHLGSCQSVRSRWNYDASVKGP IGLMGSSSCISTQGNGLPAIMTENCSAPNNTLWSTVSSAQLQLGTRVLGK DGKEKWMCLDGSKSPLISTNECICITDSHCYPKLNPEKQWFKVITTNKQL LHQLQL
No | Allergen | Sequence Link in SwissProt/NCBI/PIR | View Sequence | Sequence Length | bit score | E score | 1 | Cha o 3.0101 | C0HLA0 | Go! | 556 | 935.0 | 0.0e+00 |
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Cha o 3.0101, Sequence: C0HLA0 Sequence identity: 100.00 (556/556) Sequence 1 MTSAGVAPTALRLLTALLLLLVAAPSHSLPLLTRGRWIVDEATGLRVKLA MTSAGVAPTALRLLTALLLLLVAAPSHSLPLLTRGRWIVDEATGLRVKLA Sequence 2 MTSAGVAPTALRLLTALLLLLVAAPSHSLPLLTRGRWIVDEATGLRVKLA
Sequence 1 CVNWVGHLEPGLPEGLNRLPVATVAHTISSLGFNCVRLTYSIHMLTRTSY CVNWVGHLEPGLPEGLNRLPVATVAHTISSLGFNCVRLTYSIHMLTRTSY Sequence 2 CVNWVGHLEPGLPEGLNRLPVATVAHTISSLGFNCVRLTYSIHMLTRTSY
Sequence 1 TNATVAQTFARLNLTEAASGIEHNNPELLDLGHVAAYHHVVAALSEAGVM TNATVAQTFARLNLTEAASGIEHNNPELLDLGHVAAYHHVVAALSEAGVM Sequence 2 TNATVAQTFARLNLTEAASGIEHNNPELLDLGHVAAYHHVVAALSEAGVM
Sequence 1 VILDNHVSKPKWCCAVDDGNGFFGDRYFNPNTWVEGLGLMATYFNNTPNV VILDNHVSKPKWCCAVDDGNGFFGDRYFNPNTWVEGLGLMATYFNNTPNV Sequence 2 VILDNHVSKPKWCCAVDDGNGFFGDRYFNPNTWVEGLGLMATYFNNTPNV
Sequence 1 VAMSLRNELRGNRSTPISWSRHMQWGAATVHKANPKVLVILSGLQFDTDL VAMSLRNELRGNRSTPISWSRHMQWGAATVHKANPKVLVILSGLQFDTDL Sequence 2 VAMSLRNELRGNRSTPISWSRHMQWGAATVHKANPKVLVILSGLQFDTDL
Sequence 1 SFLPVLPVTLPFKEKIVYEGHWYSFGVPWRTGLPNDVCKNETGRFKSNVG SFLPVLPVTLPFKEKIVYEGHWYSFGVPWRTGLPNDVCKNETGRFKSNVG Sequence 2 SFLPVLPVTLPFKEKIVYEGHWYSFGVPWRTGLPNDVCKNETGRFKSNVG
Sequence 1 FVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALW FVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALW Sequence 2 FVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALW
Sequence 1 TMGGSYYYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQD TMGGSYYYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQD Sequence 2 TMGGSYYYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQD
Sequence 1 PYLAPGPYYQIIYHPASGLCVESGIGNTVHLGSCQSVRSRWNYDASVKGP PYLAPGPYYQIIYHPASGLCVESGIGNTVHLGSCQSVRSRWNYDASVKGP Sequence 2 PYLAPGPYYQIIYHPASGLCVESGIGNTVHLGSCQSVRSRWNYDASVKGP
Sequence 1 IGLMGSSSCISTQGNGLPAIMTENCSAPNNTLWSTVSSAQLQLGTRVLGK IGLMGSSSCISTQGNGLPAIMTENCSAPNNTLWSTVSSAQLQLGTRVLGK Sequence 2 IGLMGSSSCISTQGNGLPAIMTENCSAPNNTLWSTVSSAQLQLGTRVLGK
Sequence 1 DGKEKWMCLDGSKSPLISTNECICITDSHCYPKLNPEKQWFKVITTNKQL DGKEKWMCLDGSKSPLISTNECICITDSHCYPKLNPEKQWFKVITTNKQL Sequence 2 DGKEKWMCLDGSKSPLISTNECICITDSHCYPKLNPEKQWFKVITTNKQL
Sequence 1 LHQLQL LHQLQL Sequence 2 LHQLQL
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