SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY ANLKNSKGGHKCP
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Cup s 7.0102, Sequence: C0HLQ2 Sequence identity: 100.00 (63/63) Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY Sequence 2 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY
Sequence 1 ANLKNSKGGHKCP ANLKNSKGGHKCP Sequence 2 ANLKNSKGGHKCP
Alignment 2 Sequence 1: Sequence 2: Allergen Cup s 7.0101, Sequence: BBP47166 Sequence identity: 98.41 (62/63) Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MASFIPRNPIYVFLALLLIVQAWKVSTHAIEDDMKFVETGVGEKTYGGVK
Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY AQIDCDKECNRRCSKASAHDRC-KYCGICCEKCHCVPPGTAGNEDVCPCY Sequence 2 AQIDCDKECNRRCSKASAHDRCIKYCGICCEKCHCVPPGTAGNEDVCPCY
Sequence 1 ANLKNSKGGHKCP ANLKNSKGGHKCP Sequence 2 ANLKNSKGGHKCP
Alignment 3 Sequence 1: Sequence 2: Allergen Jun a 7.0101, Sequence: C0HLQ0 Sequence identity: 98.41 (62/63) Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY AQIDCDKECNRRCSKASAHDRCLKYCGICC-KCHCVPPGTAGNEDVCPCY Sequence 2 AQIDCDKECNRRCSKASAHDRCLKYCGICCKKCHCVPPGTAGNEDVCPCY
Sequence 1 ANLKNSKGGHKCP ANLKNSKGGHKCP Sequence 2 ANLKNSKGGHKCP
Alignment 4 Sequence 1: Sequence 2: Allergen Cry j 7.0101, Sequence: C0HLQ1 Sequence identity: 93.65 (59/63) Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY A-IDCDKECNRRCSKASAHDRCLKYCGICCEKC-CVPPGT-GNED-CPCY Sequence 2 AHIDCDKECNRRCSKASAHDRCLKYCGICCEKCNCVPPGTYGNEDSCPCY
Sequence 1 ANLKNSKGGHKCP ANLKNSKGGHKCP Sequence 2 ANLKNSKGGHKCP
Alignment 5 Sequence 1: Sequence 2: Allergen Pru p 7.0101, Sequence: P86888 Sequence identity: 68.25 (43/63) Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY ----CD--C--RCSKA----RCLKYCGICCEKCHCVP-GT-GN-D-CPCY Sequence 2 GSSFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCY
Sequence 1 ANLKNSKGGHKCP --LKNSKG--KCP Sequence 2 RDLKNSKGNPKCP
Alignment 6 Sequence 1: Sequence 2: Allergen Pru m 7.0101, Sequence: XP_016648029 Sequence identity: 68.25 (43/63) Sequence 1 -------------------------AQIDCDKECNRRCSKASAHDRCLKY -----------------------------CD--C--RCSKA----RCLKY Sequence 2 MKLGFATFLLVCLLLSSSVFEVTMAGSSFCDSKCGVRCSKAGYQERCLKY
Sequence 1 CGICCEKCHCVPPGTAGNEDVCPCYANLKNSKGGHKCP CGICCEKCHCVP-GT-GN-D-CPCY--LKNSKG--KCP Sequence 2 CGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP
Alignment 7 Sequence 1: Sequence 2: Allergen Pru av 7.01, Sequence: XP_021820299 Sequence identity: 66.67 (42/63) Sequence 1 -------------------------AQIDCDKECNRRCSKASAHDRCLKY -----------------------------CD--C--RCSKA----RCLKY Sequence 2 MKLGFATFLLVCLLLSSSVFEVTMAGSSFCDSKCGVRCSKAGYKERCLKY
Sequence 1 CGICCEKCHCVPPGTAGNEDVCPCYANLKNSKGGHKCP CGICCEKC-CVP-GT-GN-D-CPCY--LKNSKG--KCP Sequence 2 CGICCEKCNCVPSGTYGNKDECPCYRDLKNSKGNPKCP
Alignment 8 Sequence 1: Sequence 2: Allergen Cup s 7.01, Sequence: C0HLL6 Sequence identity: 50.79 (32/63) Sequence 1 AQIDCDKECNRRCSKASAHDRCLKYCGICCEKCHCVPPGTAGNEDVCPCY AQIDCDKECNRRCSKA--------YCGICCEKCHCVPPGT---------- Sequence 2 AQIDCDKECNRRCSKA--------YCGICCEKCHCVPPGT----------
Sequence 1 ANLKNSKGGHKCP ------------- Sequence 2 -------------
|