SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK EVKIVREFNGDEVVVTASCDGVTSVRTYKRI
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Der p 13.0101, Sequence: E0A8N8 Sequence identity: 100.00 (131/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV Sequence 2 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK Sequence 2 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK
Sequence 1 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI EVKIVREFNGDEVVVTASCDGVTSVRTYKRI Sequence 2 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI
Alignment 2 Sequence 1: Sequence 2: Allergen Der f 13.0101, Sequence: AAP35078 Sequence identity: 95.42 (125/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVA-ENDQY- Sequence 2 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAIENDQYI
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK FRSLSTFKNTE-KFKLGEEFEEDRADGKRVKTVI-K-GDNKFVQTQFGDK Sequence 2 FRSLSTFKNTEAKFKLGEEFEEDRADGKRVKTVIQKEGDNKFVQTQFGDK
Sequence 1 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI EVKI-REFNGDEVVVTASCDGVTSVRTYKRI Sequence 2 EVKIIREFNGDEVVVTASCDGVTSVRTYKRI
Alignment 3 Sequence 1: Sequence 2: Allergen Lep d 13, Sequence: Q9U5P1 Sequence identity: 83.21 (109/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV MA-I-G-YKL-KSE-FD-FLDKLGVGF-VKTAAKT-KPT-EVA---D-Y- Sequence 2 MANIAGQYKLDKSENFDQFLDKLGVGFLVKTAAKTVKPTLEVAVDGDTYI
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVI-KDGDNKFVQTQ-GDK Sequence 2 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVIVKDGDNKFVQTQYGDK
Sequence 1 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI EVK-VREF-GDEV-VTAS-DGVTSVR-YKR- Sequence 2 EVKVVREFKGDEVEVTASVDGVTSVRPYKRA
Alignment 4 Sequence 1: Sequence 2: Allergen Blo t 13, Sequence: Q17284 Sequence identity: 82.44 (108/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV ---IEGKYKLEKS--FD-FLD-LGVGFMVKTAAKTLKPT-EV----D-YV Sequence 2 -MPIEGKYKLEKSDNFDKFLDELGVGFMVKTAAKTLKPTLEVDVQGDTYV
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTV-NK-GDNKF-QTQ-GDK Sequence 2 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVVNKEGDNKFIQTQYGDK
Sequence 1 EVKIVREFN-----GDEVVVTASCDGVTSVRTYKRI EVKIVR-F------GD-VVVTAS---VTSVRTYKRI Sequence 2 EVKIVRDFSEQIDQGDDVVVTASVGDVTSVRTYKRI
Alignment 5 Sequence 1: Sequence 2: Allergen Aca s 13, Sequence: ABL09307 Sequence identity: 60.31 (79/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV M--I-G-YKLEKS--FD-FL--LG--F-----AK---PT-EV----D-Y- Sequence 2 MVQINGSYKLEKSDNFDAFLKELGLNFVTRNLAKSATPTVEVSVNGDSYT
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK ----ST-KNTEI-FKLGEEFEE-RADGK-VKTV-NK--D-KFVQ-Q-GDK Sequence 2 IKTASTLKNTEISFKLGEEFEEARADGKTVKTVVNKESDTKFVQVQQGDK
Sequence 1 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI EV-IVREF------VTA---GVTSVR-YKR- Sequence 2 EVTIVREFSDEGLTVTATVNGVTSVRFYKRQ
Alignment 6 Sequence 1: Sequence 2: Allergen Tyr p 13, Sequence: AAU11502 Sequence identity: 58.78 (77/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV M----G-YKLEKS--FD-FL--LGV-F-----AK---PT-EV----D-Y- Sequence 2 MVQLNGSYKLEKSDNFDAFLKELGVNFVTRNLAKSASPTVEVIVDGDSYT
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK ----ST-KN-EIKFKLGEEFEEDRADGK-V-T---K-GDNK-VQ-Q-GDK Sequence 2 IKTSSTLKNSEIKFKLGEEFEEDRADGKKVQTSVTKEGDNKLVQVQKGDK
Sequence 1 EVKIVREFNGDEVVVTASCDGVTSVRTYKRI -V-IVREF------VTA---GVTSVR-YKR- Sequence 2 PVTIVREFSEEGLTVTATVNGVTSVRFYKRQ
Alignment 7 Sequence 1: Sequence 2: Allergen Pen m 13.0101, Sequence: Q1KS35 Sequence identity: 49.62 (65/131) Sequence 1 MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAKENDQYV MA-IEGK-K-E-SE-FDEF---LGVG-----------PT-E--K--D-Y- Sequence 2 MAKIEGKFKMESSENFDEFMKALGVGLVMRKMGNAATPTVEITKDGDTYA
Sequence 1 FRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVINKDGDNKFVQTQFGDK -----TFK-TEIKFKLGEEFEE--ADG--VK--I--DG-NK-V--Q-GDK Sequence 2 MKTTTTFKTTEIKFKLGEEFEETTADGRVVKSTITLDG-NKLVHKQVGDK
Sequence 1 EVK-----IVREFNGDEVVVTASCDGVTSVRTYKRI- E-K-------REF--D--------D-----R-Y-R-- Sequence 2 EKKEKDSELLREFTDDKMLMECKVDDIVCKRVYSRLE
|