SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MASHIVGYPRVGRDRESSVCLGSFWDGKSSAEDLQKVAADLRASIWKQMS EAGIKYIPSNTFSYYDQVLDATAMLGAVPPRYGWNGGEIGFDVYFSMARG NASVPAMEMTKWFDTNYHYIVPELSPEIKFSYASHKAVEEYKEAKALGVE TVPVLVGPVSYLLLSKPAKGVEKSFSVLSLIGNILPVYKEVLAELKAAGA LLGQFDEPTLVKDLDAHQLQAFTHAYSELESSLSSLNVVIETYFADVTAE AFKTLTGLKGVTGYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWA NDLASSLSTLEALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDKEIKSW LAFAAQKVVEVNALAKALAGQKDEAFFTANAGAQASRRSSPRVTNEAVQK AAAALKGSDHRRATNVSSRLDAQQKKLNLPALPTTTIGSFPQTLELRRVR REYKAKKISEEEYVNAIKEEIKKVVKLQEELDIDVLVHGEPERNDMVEYF GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSFAQSTT KRPMKGMLTGPVTILKWSFVRNNQPRFETCYQIALAIKDEVEDLEKAGIT AYQIDEAALREGLPLRKSEGAFYLNWAVHSFRITNCGVQDTTQIHTHMCY SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI HSPRIPSTEEIADRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNM VAAAKLLRSQLASAK
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Mor a 2.0101, Sequence: QOS47419 Sequence identity: 100.00 (765/765) Sequence 1 MASHIVGYPRVGRDRESSVCLGSFWDGKSSAEDLQKVAADLRASIWKQMS MASHIVGYPRVGRDRESSVCLGSFWDGKSSAEDLQKVAADLRASIWKQMS Sequence 2 MASHIVGYPRVGRDRESSVCLGSFWDGKSSAEDLQKVAADLRASIWKQMS
Sequence 1 EAGIKYIPSNTFSYYDQVLDATAMLGAVPPRYGWNGGEIGFDVYFSMARG EAGIKYIPSNTFSYYDQVLDATAMLGAVPPRYGWNGGEIGFDVYFSMARG Sequence 2 EAGIKYIPSNTFSYYDQVLDATAMLGAVPPRYGWNGGEIGFDVYFSMARG
Sequence 1 NASVPAMEMTKWFDTNYHYIVPELSPEIKFSYASHKAVEEYKEAKALGVE NASVPAMEMTKWFDTNYHYIVPELSPEIKFSYASHKAVEEYKEAKALGVE Sequence 2 NASVPAMEMTKWFDTNYHYIVPELSPEIKFSYASHKAVEEYKEAKALGVE
Sequence 1 TVPVLVGPVSYLLLSKPAKGVEKSFSVLSLIGNILPVYKEVLAELKAAGA TVPVLVGPVSYLLLSKPAKGVEKSFSVLSLIGNILPVYKEVLAELKAAGA Sequence 2 TVPVLVGPVSYLLLSKPAKGVEKSFSVLSLIGNILPVYKEVLAELKAAGA
Sequence 1 LLGQFDEPTLVKDLDAHQLQAFTHAYSELESSLSSLNVVIETYFADVTAE LLGQFDEPTLVKDLDAHQLQAFTHAYSELESSLSSLNVVIETYFADVTAE Sequence 2 LLGQFDEPTLVKDLDAHQLQAFTHAYSELESSLSSLNVVIETYFADVTAE
Sequence 1 AFKTLTGLKGVTGYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWA AFKTLTGLKGVTGYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWA Sequence 2 AFKTLTGLKGVTGYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWA
Sequence 1 NDLASSLSTLEALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDKEIKSW NDLASSLSTLEALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDKEIKSW Sequence 2 NDLASSLSTLEALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDKEIKSW
Sequence 1 LAFAAQKVVEVNALAKALAGQKDEAFFTANAGAQASRRSSPRVTNEAVQK LAFAAQKVVEVNALAKALAGQKDEAFFTANAGAQASRRSSPRVTNEAVQK Sequence 2 LAFAAQKVVEVNALAKALAGQKDEAFFTANAGAQASRRSSPRVTNEAVQK
Sequence 1 AAAALKGSDHRRATNVSSRLDAQQKKLNLPALPTTTIGSFPQTLELRRVR AAAALKGSDHRRATNVSSRLDAQQKKLNLPALPTTTIGSFPQTLELRRVR Sequence 2 AAAALKGSDHRRATNVSSRLDAQQKKLNLPALPTTTIGSFPQTLELRRVR
Sequence 1 REYKAKKISEEEYVNAIKEEIKKVVKLQEELDIDVLVHGEPERNDMVEYF REYKAKKISEEEYVNAIKEEIKKVVKLQEELDIDVLVHGEPERNDMVEYF Sequence 2 REYKAKKISEEEYVNAIKEEIKKVVKLQEELDIDVLVHGEPERNDMVEYF
Sequence 1 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSFAQSTT GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSFAQSTT Sequence 2 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSFAQSTT
Sequence 1 KRPMKGMLTGPVTILKWSFVRNNQPRFETCYQIALAIKDEVEDLEKAGIT KRPMKGMLTGPVTILKWSFVRNNQPRFETCYQIALAIKDEVEDLEKAGIT Sequence 2 KRPMKGMLTGPVTILKWSFVRNNQPRFETCYQIALAIKDEVEDLEKAGIT
Sequence 1 AYQIDEAALREGLPLRKSEGAFYLNWAVHSFRITNCGVQDTTQIHTHMCY AYQIDEAALREGLPLRKSEGAFYLNWAVHSFRITNCGVQDTTQIHTHMCY Sequence 2 AYQIDEAALREGLPLRKSEGAFYLNWAVHSFRITNCGVQDTTQIHTHMCY
Sequence 1 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI Sequence 2 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI
Sequence 1 HSPRIPSTEEIADRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNM HSPRIPSTEEIADRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNM Sequence 2 HSPRIPSTEEIADRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNM
Sequence 1 VAAAKLLRSQLASAK VAAAKLLRSQLASAK Sequence 2 VAAAKLLRSQLASAK
Alignment 2 Sequence 1: Sequence 2: Allergen Sal k 3.0101, Sequence: ACO34814 Sequence identity: 85.88 (657/765) Sequence 1 MASHIVGYPRVGRDRESSVCLGSFWDGKSSAEDLQKVAADLRASIWKQMS MASH-VGYPR-G--RE----L-SFWDGKSSAEDL-KVAADLR-SIWKQM- Sequence 2 MASHVVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMA
Sequence 1 EAGIKYIPSNTFSYYDQVLDATAMLGAVPPRYGWNGGEIGFDVYFSMARG -AGIKYIPSNTF-YYDQVLD-TAMLGAVP-RYG-NGGEIGFD-YFSMARG Sequence 2 DAGIKYIPSNTFAYYDQVLDTTAMLGAVPARYGFNGGEIGFDLYFSMARG
Sequence 1 NASVPAMEMTKWFDTNYHYIVPELSPEIKFSYASHKAVEEYKEAKALGVE NAS-PAMEMTKWFDTNYHYIVPEL-PE-KF-Y-SHKAV-EYKEAKALGV- Sequence 2 NASLPAMEMTKWFDTNYHYIVPELGPEVKFAYSSHKAVDEYKEAKALGVD
Sequence 1 TVPVLVGPVSYLLLSKPAKGVEKSFSVLSLIGNILPVYKEVLAELKAAGA TVPVLVGPVSYLLLSK-AKGVEKSF--LSL---ILPVYKEV-AELKAAGA Sequence 2 TVPVLVGPVSYLLLSKAAKGVEKSFPLLSLLPKILPVYKEVIAELKAAGA
Sequence 1 LLGQFDEPTLVKDLDAHQLQAFTHAYSELESSLSSLNVVIETYFADVTAE ---QFDEPTLV-DL--HQL-AFT-AY--LES-LS-LNV--ETYFAD-T-E Sequence 2 STIQFDEPTLVMDLESHQLKAFTDAYADLESTLSGLNVLVETYFADLTPE
Sequence 1 AFKTLTGLKGVTGYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWA A-KTL--L-GVT--GFDLVRGTKTLDLIK-GFPSGKYLFAGVVDGRNIWA Sequence 2 AYKTLVSLNGVTAFGFDLVRGTKTLDLIKSGFPSGKYLFAGVVDGRNIWA
Sequence 1 NDLASSLSTLEALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDKEIKSW NDLA-SL-TL--LE-IVGKDKLVVSTSCSLLHTAVDLVNETKLD-EIKSW Sequence 2 NDLAASLATLQSLESIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSW
Sequence 1 LAFAAQKVVEVNALAKALAGQKDEAFFTANAGAQASRRSSPRVTNEAVQK LAFAAQKV-EVNALAKALAGQKDEAFF-ANA-A-ASR-SSPRVTNEAVQK Sequence 2 LAFAAQKVLEVNALAKALAGQKDEAFFSANAAALASRKSSPRVTNEAVQK
Sequence 1 AAAALKGSDHRRATNVSSRLDAQQKKLNLPALPTTTIGSFPQTLELRRVR AAA-LKGSDHRRAT-VS-RLDAQQKKLNLP-LPTTTIGSFPQT-ELRRVR Sequence 2 AAAGLKGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVR
Sequence 1 REYKAKKISEEEYVNAIKEEIKKVVKLQEELDIDVLVHGEPERNDMVEYF REYKAKKISEEEYV-AIKEEI-KVVKLQEELDIDVLVHGEPERNDMVEYF Sequence 2 REYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYF
Sequence 1 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSFAQSTT GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPK-MTVFWSS-AQS-T Sequence 2 GEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMT
Sequence 1 KRPMKGMLTGPVTILKWSFVRNNQPRFETCYQIALAIKDEVEDLEKAGIT -RPMKGMLTGPVTIL-WSFVRN-QPR-ETCYQIALAI-DE-EDLEKAGI- Sequence 2 SRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIEDEAEDLEKAGIN
Sequence 1 AYQIDEAALREGLPLRKSEGAFYLNWAVHSFRITNCGVQDTTQIHTHMCY --QIDEAALREGLPLRKS---FYL-WAVHSFRITN-G-QDTTQIHTHMCY Sequence 2 VIQIDEAALREGLPLRKSGHGFYLQWAVHSFRITNVGIQDTTQIHTHMCY
Sequence 1 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI Sequence 2 SNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDI
Sequence 1 HSPRIPSTEEIADRINKMLAVLESNILWVNPDCGLKTRKYSEVKPALSNM HSPRIP-TEE-ADRI-KMLAVLESN-LWVNPDCGLKTRKY-EV-PALSNM Sequence 2 HSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYNEVNPALSNM
Sequence 1 VAAAKLLRSQLASAK V-AAK---------- Sequence 2 VYAAKPI--------
|