SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV ESQTN
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Gal d 2, Sequence: CAA23681 Sequence identity: 100.00 (155/155) Sequence 1 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST Sequence 2 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST
Sequence 1 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF Sequence 2 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF
Sequence 1 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV Sequence 2 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV
Sequence 1 ESQTN ESQTN Sequence 2 ESQTN
Alignment 2 Sequence 1: Sequence 2: Allergen Gal d 2, Sequence: CAA23682 Sequence identity: 98.71 (153/155) Sequence 1 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST MGSI-AASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST Sequence 2 MGSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST
Sequence 1 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF Sequence 2 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF
Sequence 1 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV SLASRLYAEERYPILPEY-QCVKELYRGGLEPINFQTAADQARELINSWV Sequence 2 SLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWV
Sequence 1 ESQTN--------------------------------------------- ESQTN--------------------------------------------- Sequence 2 ESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKTFKDEDTQAMPFR
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MGITDVFSSSANLSGISSAESLKISQAVHAAHAEINEAGREVVGSAEAGV
Sequence 1 ------------------------------------ ------------------------------------ Sequence 2 DAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP
Alignment 3 Sequence 1: Sequence 2: Allergen Gal d 2, Sequence: CAA23716 Sequence identity: 98.71 (153/155) Sequence 1 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST MGSI-AASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST Sequence 2 MGSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST
Sequence 1 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF Sequence 2 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF
Sequence 1 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV SLASRLYAEERYPILPEY-QCVKELYRGGLEPINFQTAADQARELINSWV Sequence 2 SLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWV
Sequence 1 ESQTN--------------------------------------------- ESQTN--------------------------------------------- Sequence 2 ESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFR
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MGITDVFSSSANLSGISSAESLKISQAVHAAHAEINEAGREVVGSAEAGV
Sequence 1 ------------------------------------ ------------------------------------ Sequence 2 DAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP
Alignment 4 Sequence 1: Sequence 2: Allergen Gal d 2, Sequence: P01012 Sequence identity: 98.06 (152/155) Sequence 1 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST -GSI-AASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST Sequence 2 -GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST
Sequence 1 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF Sequence 2 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF
Sequence 1 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV SLASRLYAEERYPILPEY-QCVKELYRGGLEPINFQTAADQARELINSWV Sequence 2 SLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWV
Sequence 1 ESQTN--------------------------------------------- ESQTN--------------------------------------------- Sequence 2 ESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFR
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 VTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MGITDVFSSSANLSGISSAESLKISQAVHAAHAEINEAGREVVGSAEAGV
Sequence 1 ------------------------------------ ------------------------------------ Sequence 2 DAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP
Alignment 5 Sequence 1: Sequence 2: Allergen Gal d 2, Sequence: AAA68882 Sequence identity: 51.61 (80/155) Sequence 1 MGSIAAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDST M-SI------FCFDVF-E-KVHH-NENI-YCP--I--ALAMVYLGA---T Sequence 2 MDSISVTNAKFCFDVFNEMKVHHVNENILYCPLSILTALAMVYLGARGNT
Sequence 1 RTQINKVVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSF --Q--KV--FD---G-G-----QCG-S--VH------L--IT-PN--YS- Sequence 2 ESQMKKVLHFDSITGAGSTTDSQCGSSEYVHNLFKELLSEITRPNATYSL
Sequence 1 SLASRLYAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWV --A--LY-------LPEY--C----Y-GG-E--NF-TAA--AR-LINSWV Sequence 2 EIADKLYVDKTFSVLPEYLSCARKFYTGGVEEVNFKTAAEEARQLINSWV
Sequence 1 ESQTN--------------------------------------------- E--TN--------------------------------------------- Sequence 2 EKETNGQIKDLLVSSSIDFGTTMVFINTIYFKGIWKIAFNTEDTREMPFS
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 MTKEESKPVQMMCMNNSFNVATLPAEKMKILELPYASGDLSMLVLLPDEV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 SGLERIEKTINFDKLREWTSTNAMAKKSMKVYLPRMKIEEKYNLTSILMA
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LGMTDLFSRSANLTGISSVDNLMISDAVHGVFMEVNEEGTEATGSTGAIG
Sequence 1 -------------------------------------- -------------------------------------- Sequence 2 NIKHSLELEEFRADHPFLFFIRYNPTNAILFFGRYWSP
Alignment 6 Sequence 1: Sequence 2: Allergen Der f 27.0101, Sequence: AIO08851 Sequence identity: 26.45 (41/155) Sequence 1 -------------------------------------MGSIAAASMEFCF -----------------------------------------A-AS-EF-F Sequence 2 MKFFLLSFVLMIVAATATYAAHVGSGSRDNNNNKPVPAEGFAKASNEFGF
Sequence 1 DVFKELKVHHAN-------ENIFYCPIAIMSALAMVYLGAKDSTRTQINK ---KE---H----------EN----P-----AL-MV--G---ST--Q--- Sequence 2 HLLKEVIQHRSSSGSRGSSENVLFSPYSVAVALSMVHQGTQGSTAEQFKR
Sequence 1 VVRFDKLPGFGDSIEAQCGTSVNVHSSLRDILNQITKPNDVYSFSLASRL V---D-------------G----V--S---I-NQI--------F-----L Sequence 2 VLYYDRVQQLNG------GEYQTVANSVKQIQNQIKQSDQSNQFDWGNML
Sequence 1 YAEERYPILPEYFQCVKELYRGGLEPINFQTAADQARELINSWVESQTN- ------P----Y-------Y-G------F--------E-IN--V---T-- Sequence 2 MVDQQIPVKDQYKKIIEQYYDGQVMSVDFRKESKNVMERINQFVSNKTHG
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 LIDRMLEQPPSADTGLALINAVYFKGEWLKPFDSMRTEQSVFYGHHGQEY
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 KNVQYINGQGPYGYVEVPQWNSDLIQLPYKGEDIAFYGVLPRERNYDLDK
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 IRQSINSTFVDEIVGQITGGQSSTVYFPKIELSTSYQLPEILKSMGLQDV
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 FTESADLSGITDKKPMKIDDAIHKAKLILNEQGTEAGAGTYIQMAVLSAL
Sequence 1 --------------------------------- --------------------------------- Sequence 2 ETSHTFRFDHPFMYFIRHLPTGQILFLGEIHDF
|