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SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Hev b 1, Sequence: CAA39880 Sequence identity: 100.00 (138/138) Sequence 1 MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV Sequence 2 MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV
Sequence 1 DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD Sequence 2 DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD
Sequence 1 ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN Sequence 2 ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN
Alignment 2 Sequence 1: Sequence 2: Allergen Hev b 1, Sequence: P15252 Sequence identity: 99.28 (137/138) Sequence 1 MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV -AEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV Sequence 2 -AEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV
Sequence 1 DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD Sequence 2 DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD
Sequence 1 ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN Sequence 2 ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN
Alignment 3 Sequence 1: Sequence 2: Allergen Hev b 3, Sequence: O82803 Sequence identity: 42.75 (59/138) Sequence 1 MAEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGV ------------E-LKYL-FV--A--YAV--FS--YL-AKD-SGPL-PGV Sequence 2 -----MAEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGV
Sequence 1 DIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKD D-IE--VK-V--P-Y----YIP--A-KFVD-TV--SVT--D---PP--K- Sequence 2 DTIENVVKTVVTPVY----YIPLEAVKFVDKTVDVSVTSLDGVVPPVIKQ
Sequence 1 ASIQVVSAIRAAPEAARSLASSLPGQTKILAKVFYGEN------------ -S-Q--S----AP------ASS---------------N------------ Sequence 2 VSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVIT
Sequence 1 -------------------------------------------------- -------------------------------------------------- Sequence 2 WRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLP
Sequence 1 ------------- ------------- Sequence 2 TEKITKVFGDEAS
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