SDAP Home Page
SDAP Overview
SDAP All
SDAP Food
Use SDAP All
Search SDAP All
List SDAP All
SDAP Food
SDAP Tools
FAO/WHO Allergenicity Test
FASTA Search in SDAP
Peptide Match
Peptide Similarity
Peptide-Protein PD Index
Aller_ML, Allergen Markup Language
List SDAP
About SDAP
General Information
Manual
FAQ
Publications
Who Are We
Advisory Board
Allergy Links
Our Software Tools
MPACK
FANTOM
GETAREA
NOAH/DIAMOD
MASIA
PCPMer
InterProSurf
EpiSearch
Protein Databases
PDB
MMDB - Entrez
SWISS-PROT
NCBI - Entrez
PIR
Protein Classification
CATH
CE
FSSP
iProClass
ProtoMap
SCOP
TOPS
VAST
Bioinformatics Servers
@TOME
BLAST @ NCBI
BLAST @ PIR
FASTA @ PIR
Peptide Match @ PIR
ClustalW @ BCM
ClustalW @ EMBL - EBI
ClustalW @ PIR
Bioinformatics Tools
Cn3D
MolMol
Bioinformatics Links
Bioinformatics Links Directory
|
SDAP - All Allergens
Full FASTA alignment
Sequence name: Query sequence: MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN LYSYINIAYLNIFGEGRYLSLNISGHCSDCTFLGEEIKACQSQGVKIFLS LGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVELDGID LDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSDAYLWTA VETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEGNKLL IGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRYYDLK TNYSSSIILEYVNSGTKYLPLRTKFMYQNA
Alignment made with FASTA 3.45 As explained in the FASTA manual, the bit score is equivalent to the bit score reported by BLAST. A 1 bit increase in score corresponds to a 2-fold reduction in expectation, and a 10-bit increase implies 1000-fold lower expectation. Sequences with E values < 0.01 are almost always homologous.
Alignment 1 Sequence 1: Sequence 2: Allergen Ziz m 1.0101, Sequence: Q2VST0 Sequence identity: 100.00 (330/330) Sequence 1 MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN Sequence 2 MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN
Sequence 1 LYSYINIAYLNIFGEGRYLSLNISGHCSDCTFLGEEIKACQSQGVKIFLS LYSYINIAYLNIFGEGRYLSLNISGHCSDCTFLGEEIKACQSQGVKIFLS Sequence 2 LYSYINIAYLNIFGEGRYLSLNISGHCSDCTFLGEEIKACQSQGVKIFLS
Sequence 1 LGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVELDGID LGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVELDGID Sequence 2 LGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVELDGID
Sequence 1 LDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSDAYLWTA LDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSDAYLWTA Sequence 2 LDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSDAYLWTA
Sequence 1 VETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEGNKLL VETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEGNKLL Sequence 2 VETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEGNKLL
Sequence 1 IGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRYYDLK IGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRYYDLK Sequence 2 IGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRYYDLK
Sequence 1 TNYSSSIILEYVNSGTKYLPLRTKFMYQNA TNYSSSIILEYVNSGTKYLPLRTKFMYQNA Sequence 2 TNYSSSIILEYVNSGTKYLPLRTKFMYQNA
Alignment 2 Sequence 1: Sequence 2: Allergen Pun g 14.0101, Sequence: G1UH28 Sequence identity: 37.58 (124/330) Sequence 1 MVPQAKLVVASLILTSALIQTSEAV--GGIATYWGQYTETEEGSLAEACA -----------L-L---------A---G-IA-YWGQ-----EG-LA--C- Sequence 2 -MAKTLPFSRALLLSLSILLVARAISAGDIAIYWGQ--NGGEGTLASTCD
Sequence 1 SNLYSYINIAYLNIFGEGRYLSLNISGHC----SDCTFLGEEIKACQSQG ---Y-Y--------FG--R----N--GHC------CT-L--EI--CQ--- Sequence 2 TGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKD
Sequence 1 VKIFLSLGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDV -K---S-GG--GDY-L----DAD--A--LW--FLGG--S-----PL-GD- Sequence 2 IKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSS---RPL-GDA
Sequence 1 ELDGIDLDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSD -LDGID-DI--G----YD-LAR-L-----------YL-AAP-C------D Sequence 2 VLDGIDFDIELGTTTFYDTLARALSSRSTQAAK-VYLTAAPQCP---HPD
Sequence 1 AYLWTAVETGLFDFVWVKFYND--TSCQYNNDTAAGLDAFYRSWYDWTVS --L--A--TGLFD-VW--FYN-----CQY-------------SW--WT-S Sequence 2 SHLDAALNTGLFDNVWIQFYNNPLAQCQY---SSGNTNDILSSWNTWTSS
Sequence 1 LAEGNKLLIGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNV ---G-K---G-PA--E---S---GYIP-DVL--QI---I-TS-K-GGV-- Sequence 2 TTAG-KIFLGLPAAPEAAGS---GYIPPDVLTGQILPQIKTSAKYGGVML
Sequence 1 WNRYYDLKTNYSSSIILEYVNSGTKYLPLRTKFMYQNA ----YD--T-YS--I----------------------- Sequence 2 YSKFYD--TTYSTTIKDQV-------------------
Alignment 3 Sequence 1: Sequence 2: Allergen Hev b 14.0101, Sequence: ADR82196 Sequence identity: 26.36 (87/330) Sequence 1 MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN -------------------------GGI--YWGQ-----EG-L---C--- Sequence 2 -------------------------GGIVIYWGQ--NGNEGTLTQTCSTR
Sequence 1 LYSYINIAYLNIFGEGRYLSLNISGHCSD----CTFLGEEIKACQSQGVK -YSY-NIA-LN-FG-G-----N--GHC------CT-----I--CQ-QG-K Sequence 2 KYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIK
Sequence 1 IFLSLGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVEL --LSLGG--G-Y-L----DA--VA--LWS-FLGG--S-----PL-GD--L Sequence 2 VMLSLGGGIGSYTLASQADAKNVADYLWSNFLGGKSSS---RPL-GDAVL
Sequence 1 DGIDLDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSAAPKCSAYNDSDAY DGID-DI--G-----D-LAR-L----K------YL-AAP-C------D-Y Sequence 2 DGIDFDIEHGSTLYWDDLARYLSAYSK-QGKKVYLTAAPQCPF---PDRY
Sequence 1 LWTAVETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEG L-TA--TGL-------------------T--------------------- Sequence 2 LGTALNTGLLTMYGFNSITIHHASIAQVTLTTSLTRGIDGPHL-------
Sequence 1 NKLLIGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRY -------------------------------------------------- Sequence 2 --------------------------------------------------
Sequence 1 YDLKTNYSSSIILEYVNSGTKYLPLRTKFMYQNA ---------------------------------- Sequence 2 ----------------------------------
Alignment 4 Sequence 1: Sequence 2: Allergen Cof a 1.0101, Sequence: ADH10372 Sequence identity: 28.18 (93/330) Sequence 1 MVPQAKLVVASLILTSALIQTSEAVGGIATYWGQYTETEEGSLAEACASN --------------------------GI--YWG-----E--SLAE----- Sequence 2 -------------------------AGIVRYWGRGHD-EPSSLAEFGRQE
Sequence 1 LYSYINIAYLNIFGEGRYLSLNISGHCSDCTFLGEEIKACQSQGVKIFLS -----NIA-L--FG-GR---LNIS------------I--CQ----K-F-S Sequence 2 FATDVNIAFLEDFGGGRMPELNISHPLPSAS----DIEYCQKHQTKVFIS
Sequence 1 LGGPYGDYHLTTDGDADRVAEQLWSSFLGGSKSTGVYQPLLGDVELDGID --G------L----DA--VA---W---LGG--S-----P--G---LDG-- Sequence 2 IAGQPS---LSSVEDAEEVAAYVWNTYLGGKSSD---RPF-GKAVLDGVE
Sequence 1 LDIQIGPPEEYDVLARNLKDLTKDRTRPFYLSA-APKCSAYNDSDAYLWT L-I--G-----D-LAR-LK------------SA-A--C------D--L-T Sequence 2 LHIHSGNTTYLDDLARALKGYSN------VISAVAAECPI---PDPALDT
Sequence 1 AVETGLFDFVWVKFYNDTSCQYNNDTAAGLDAFYRSWYDWTVSLAEGNKL ---TG--D-V-V-F----SCQ--------L-----SW--W--------KL Sequence 2 TIRTGVVDQVRVEFFDNPSCQFTPPKDTSL--LFPSWDNWS-DYPGVHKL
Sequence 1 LIGIPASNETDNSPLGGYIPSDVLNDQIVSVIMTSSKFGGVNVWNRYYDL --GIP-S------P-GGYIP---L----------S---GG--V---Y--- Sequence 2 YLGIPISPTI--APEGGYIPPNELVYHVLPYLKKSPVYGGIMVFP-YLHH
Sequence 1 KTNYSSSIILEYVNSGTKYLPLRTKFMYQNA --N--S------------------------- Sequence 2 EVNFQSMLRSYARAA----------------
|