List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKG
LNLNLAAGLPGKCGVSVPYKISPSTDCKSVK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
39       47 KTTADRQAA       5.003       Click here for PD Search       Click here for Cross-React search
38       46 AKTTADRQA       5.003       Click here for PD Search       Click here for Cross-React search
37       45 AAKTTADRQ       5.003       Click here for PD Search       Click here for Cross-React search
78       86 PYKISPSTD       4.675       Click here for PD Search       Click here for Cross-React search
36       44 NAAKTTADR       4.646       Click here for PD Search       Click here for Cross-React search
35       43 NNAAKTTAD       3.814       Click here for PD Search       Click here for Cross-React search
32       40 RSLNNAAKT       3.391       Click here for PD Search       Click here for Cross-React search
33       41 SLNNAAKTT       2.499       Click here for PD Search       Click here for Cross-React search
83       91 PSTDCKSVK       2.19       Click here for PD Search       Click here for Cross-React search
77       85 VPYKISPST       2.078       Click here for PD Search       Click here for Cross-React search
80       88 KISPSTDCK       2.068       Click here for PD Search       Click here for Cross-React search
76       84 SVPYKISPS       1.929       Click here for PD Search       Click here for Cross-React search
34       42 LNNAAKTTA       1.884       Click here for PD Search       Click here for Cross-React search
31       39 VRSLNNAAK       1.744       Click here for PD Search       Click here for Cross-React search
79       87 YKISPSTDC       1.621       Click here for PD Search       Click here for Cross-React search
41       49 TADRQAACN       1.494       Click here for PD Search       Click here for Cross-React search
82       90 SPSTDCKSV       1.468       Click here for PD Search       Click here for Cross-React search
52       60 KSAFNSIKG       1.441       Click here for PD Search       Click here for Cross-React search
81       89 ISPSTDCKS       1.386       Click here for PD Search       Click here for Cross-React search
29       37 NGVRSLNNA       1.374       Click here for PD Search       Click here for Cross-React search
40       48 TTADRQAAC       1.341       Click here for PD Search       Click here for Cross-React search
51       59 LKSAFNSIK       1.201       Click here for PD Search       Click here for Cross-React search
56       64 NSIKGLNLN       1.081       Click here for PD Search       Click here for Cross-React search
75       83 VSVPYKISP       1.069       Click here for PD Search       Click here for Cross-React search
30       38 GVRSLNNAA       0.863       Click here for PD Search       Click here for Cross-React search
4       12 GQVSSSLAP       0.811       Click here for PD Search       Click here for Cross-React search
72       80 KCGVSVPYK       0.78       Click here for PD Search       Click here for Cross-React search
49       57 NCLKSAFNS       0.739       Click here for PD Search       Click here for Cross-React search
28       36 CNGVRSLNN       0.729       Click here for PD Search       Click here for Cross-React search
54       62 AFNSIKGLN       0.713       Click here for PD Search       Click here for Cross-React search
64       72 NLAAGLPGK       0.695       Click here for PD Search       Click here for Cross-React search
74       82 GVSVPYKIS       0.684       Click here for PD Search       Click here for Cross-React search
59       67 KGLNLNLAA       0.602       Click here for PD Search       Click here for Cross-React search
53       61 SAFNSIKGL       0.594       Click here for PD Search       Click here for Cross-React search
55       63 FNSIKGLNL       0.582       Click here for PD Search       Click here for Cross-React search
57       65 SIKGLNLNL       0.555       Click here for PD Search       Click here for Cross-React search
42       50 ADRQAACNC       0.555       Click here for PD Search       Click here for Cross-React search
18       26 RAGGVVPAN       0.551       Click here for PD Search       Click here for Cross-React search
44       52 RQAACNCLK       0.543       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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