List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKLSCLLLTLAIIFVLTIVHAPNVKAKALADPESDAVGFADAVGEADPFDITKLNIKKLT
KATCKVISKGASMCKVLFDKKKQE

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
75       83 KVLFDKKKQ       4.63       Click here for PD Search       Click here for Cross-React search
76       84 VLFDKKKQE       4.009       Click here for PD Search       Click here for Cross-React search
53       61 KLNIKKLTK       3.342       Click here for PD Search       Click here for Cross-React search
27       35 KALADPESD       3.181       Click here for PD Search       Click here for Cross-React search
55       63 NIKKLTKAT       2.954       Click here for PD Search       Click here for Cross-React search
25       33 KAKALADPE       2.871       Click here for PD Search       Click here for Cross-React search
57       65 KKLTKATCK       2.809       Click here for PD Search       Click here for Cross-React search
45       53 EADPFDITK       2.496       Click here for PD Search       Click here for Cross-React search
52       60 TKLNIKKLT       2.412       Click here for PD Search       Click here for Cross-React search
50       58 DITKLNIKK       2.372       Click here for PD Search       Click here for Cross-React search
20       28 HAPNVKAKA       1.955       Click here for PD Search       Click here for Cross-React search
26       34 AKALADPES       1.924       Click here for PD Search       Click here for Cross-React search
47       55 DPFDITKLN       1.892       Click here for PD Search       Click here for Cross-React search
54       62 LNIKKLTKA       1.688       Click here for PD Search       Click here for Cross-React search
28       36 ALADPESDA       1.607       Click here for PD Search       Click here for Cross-React search
19       27 VHAPNVKAK       1.437       Click here for PD Search       Click here for Cross-React search
74       82 CKVLFDKKK       1.433       Click here for PD Search       Click here for Cross-React search
30       38 ADPESDAVG       1.417       Click here for PD Search       Click here for Cross-React search
23       31 NVKAKALAD       1.28       Click here for PD Search       Click here for Cross-React search
44       52 GEADPFDIT       1.235       Click here for PD Search       Click here for Cross-React search
24       32 VKAKALADP       1.231       Click here for PD Search       Click here for Cross-React search
31       39 DPESDAVGF       1.214       Click here for PD Search       Click here for Cross-React search
46       54 ADPFDITKL       1.188       Click here for PD Search       Click here for Cross-React search
22       30 PNVKAKALA       1.185       Click here for PD Search       Click here for Cross-React search
21       29 APNVKAKAL       1.185       Click here for PD Search       Click here for Cross-React search
29       37 LADPESDAV       1.18       Click here for PD Search       Click here for Cross-React search
51       59 ITKLNIKKL       1.171       Click here for PD Search       Click here for Cross-React search
40       48 ADAVGEADP       1.068       Click here for PD Search       Click here for Cross-React search
58       66 KLTKATCKV       1.043       Click here for PD Search       Click here for Cross-React search
49       57 FDITKLNIK       1.027       Click here for PD Search       Click here for Cross-React search
56       64 IKKLTKATC       0.985       Click here for PD Search       Click here for Cross-React search
42       50 AVGEADPFD       0.915       Click here for PD Search       Click here for Cross-React search
41       49 DAVGEADPF       0.915       Click here for PD Search       Click here for Cross-React search
61       69 KATCKVISK       0.823       Click here for PD Search       Click here for Cross-React search
48       56 PFDITKLNI       0.794       Click here for PD Search       Click here for Cross-React search
33       41 ESDAVGFAD       0.793       Click here for PD Search       Click here for Cross-React search
32       40 PESDAVGFA       0.735       Click here for PD Search       Click here for Cross-React search
17       25 TIVHAPNVK       0.719       Click here for PD Search       Click here for Cross-React search
73       81 MCKVLFDKK       0.709       Click here for PD Search       Click here for Cross-React search
65       73 KVISKGASM       0.698       Click here for PD Search       Click here for Cross-React search
43       51 VGEADPFDI       0.635       Click here for PD Search       Click here for Cross-React search
39       47 FADAVGEAD       0.598       Click here for PD Search       Click here for Cross-React search
60       68 TKATCKVIS       0.594       Click here for PD Search       Click here for Cross-React search
68       76 SKGASMCKV       0.534       Click here for PD Search       Click here for Cross-React search
67       75 ISKGASMCK       0.504       Click here for PD Search       Click here for Cross-React search
18       26 IVHAPNVKA       0.504       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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