List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

ALSCGTVNSNLAACIGYLTQNAPLPKGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFP
SLNAARAAALPKACGVNIPYKISKSTNCNSVR

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
40       48 RTTPDRQQA       8.501       Click here for PD Search       Click here for Cross-React search
39       47 ARTTPDRQQ       8.501       Click here for PD Search       Click here for Cross-React search
38       46 MARTTPDRQ       4.858       Click here for PD Search       Click here for Cross-React search
37       45 NMARTTPDR       4.511       Click here for PD Search       Click here for Cross-React search
79       87 PYKISKSTN       3.85       Click here for PD Search       Click here for Cross-React search
36       44 NNMARTTPD       3.704       Click here for PD Search       Click here for Cross-React search
42       50 TPDRQQACR       3.158       Click here for PD Search       Click here for Cross-React search
41       49 TTPDRQQAC       2.327       Click here for PD Search       Click here for Cross-React search
19       27 TQNAPLPKG       2.155       Click here for PD Search       Click here for Cross-React search
34       42 NLNNMARTT       1.902       Click here for PD Search       Click here for Cross-React search
33       41 TNLNNMART       1.902       Click here for PD Search       Click here for Cross-React search
77       85 NIPYKISKS       1.87       Click here for PD Search       Click here for Cross-React search
35       43 LNNMARTTP       1.829       Click here for PD Search       Click here for Cross-React search
18       26 LTQNAPLPK       1.796       Click here for PD Search       Click here for Cross-React search
78       86 IPYKISKST       1.678       Click here for PD Search       Click here for Cross-React search
84       92 KSTNCNSVR       1.42       Click here for PD Search       Click here for Cross-React search
17       25 YLTQNAPLP       1.407       Click here for PD Search       Click here for Cross-React search
81       89 KISKSTNCN       1.37       Click here for PD Search       Click here for Cross-React search
80       88 YKISKSTNC       1.335       Click here for PD Search       Click here for Cross-React search
43       51 PDRQQACRC       1.173       Click here for PD Search       Click here for Cross-React search
76       84 VNIPYKISK       1.036       Click here for PD Search       Click here for Cross-React search
32       40 VTNLNNMAR       0.978       Click here for PD Search       Click here for Cross-React search
83       91 SKSTNCNSV       0.972       Click here for PD Search       Click here for Cross-React search
82       90 ISKSTNCNS       0.918       Click here for PD Search       Click here for Cross-React search
16       24 GYLTQNAPL       0.9       Click here for PD Search       Click here for Cross-React search
58       66 SFPSLNAAR       0.867       Click here for PD Search       Click here for Cross-React search
20       28 QNAPLPKGC       0.8       Click here for PD Search       Click here for Cross-React search
15       23 IGYLTQNAP       0.765       Click here for PD Search       Click here for Cross-React search
60       68 PSLNAARAA       0.762       Click here for PD Search       Click here for Cross-React search
65       73 ARAAALPKA       0.715       Click here for PD Search       Click here for Cross-React search
64       72 AARAAALPK       0.715       Click here for PD Search       Click here for Cross-React search
57       65 NSFPSLNAA       0.712       Click here for PD Search       Click here for Cross-React search
56       64 ANSFPSLNA       0.712       Click here for PD Search       Click here for Cross-React search
55       63 AANSFPSLN       0.712       Click here for PD Search       Click here for Cross-React search
30       38 TGVTNLNNM       0.706       Click here for PD Search       Click here for Cross-React search
59       67 FPSLNAARA       0.653       Click here for PD Search       Click here for Cross-React search
44       52 DRQQACRCL       0.625       Click here for PD Search       Click here for Cross-React search
63       71 NAARAAALP       0.575       Click here for PD Search       Click here for Cross-React search
75       83 GVNIPYKIS       0.512       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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