List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

VTCTPTELSPCLGAITGGSPPSSVCCQKLRAQKPCLCNYIKNPALRTYVNSPGARRVASS
CGVPLPSC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
27       35 QKLRAQKPC       3.133       Click here for PD Search       Click here for Cross-React search
26       34 CQKLRAQKP       3.133       Click here for PD Search       Click here for Cross-React search
48       56 YVNSPGARR       2.87       Click here for PD Search       Click here for Cross-React search
38       46 NYIKNPALR       2.768       Click here for PD Search       Click here for Cross-React search
41       49 KNPALRTYV       2.63       Click here for PD Search       Click here for Cross-React search
40       48 IKNPALRTY       2.484       Click here for PD Search       Click here for Cross-React search
39       47 YIKNPALRT       2.484       Click here for PD Search       Click here for Cross-React search
47       55 TYVNSPGAR       2.115       Click here for PD Search       Click here for Cross-React search
46       54 RTYVNSPGA       2.115       Click here for PD Search       Click here for Cross-React search
42       50 NPALRTYVN       2.115       Click here for PD Search       Click here for Cross-React search
50       58 NSPGARRVA       1.85       Click here for PD Search       Click here for Cross-React search
44       52 ALRTYVNSP       1.762       Click here for PD Search       Click here for Cross-React search
43       51 PALRTYVNS       1.762       Click here for PD Search       Click here for Cross-React search
45       53 LRTYVNSPG       1.726       Click here for PD Search       Click here for Cross-React search
52       60 PGARRVASS       1.542       Click here for PD Search       Click here for Cross-React search
51       59 SPGARRVAS       1.542       Click here for PD Search       Click here for Cross-React search
28       36 KLRAQKPCL       1.492       Click here for PD Search       Click here for Cross-React search
2       10 TCTPTELSP       1.424       Click here for PD Search       Click here for Cross-React search
49       57 VNSPGARRV       1.359       Click here for PD Search       Click here for Cross-React search
16       24 TGGSPPSSV       1.166       Click here for PD Search       Click here for Cross-React search
15       23 ITGGSPPSS       1.101       Click here for PD Search       Click here for Cross-React search
25       33 CCQKLRAQK       1.086       Click here for PD Search       Click here for Cross-React search
14       22 AITGGSPPS       0.83       Click here for PD Search       Click here for Cross-React search
4       12 TPTELSPCL       0.814       Click here for PD Search       Click here for Cross-React search
30       38 RAQKPCLCN       0.78       Click here for PD Search       Click here for Cross-React search
37       45 CNYIKNPAL       0.757       Click here for PD Search       Click here for Cross-React search
36       44 LCNYIKNPA       0.757       Click here for PD Search       Click here for Cross-React search
1       9 VTCTPTELS       0.683       Click here for PD Search       Click here for Cross-React search
31       39 AQKPCLCNY       0.624       Click here for PD Search       Click here for Cross-React search
13       21 GAITGGSPP       0.613       Click here for PD Search       Click here for Cross-React search
20       28 PPSSVCCQK       0.612       Click here for PD Search       Click here for Cross-React search
5       13 PTELSPCLG       0.558       Click here for PD Search       Click here for Cross-React search
54       62 ARRVASSCG       0.535       Click here for PD Search       Click here for Cross-React search
53       61 GARRVASSC       0.535       Click here for PD Search       Click here for Cross-React search
3       11 CTPTELSPC       0.529       Click here for PD Search       Click here for Cross-React search
33       41 KPCLCNYIK       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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