List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAPKASSLTLSAIFLLFLVASYSVGVAQGARAATEGEVVYPEALCEKPSQTWTGKCGNTK
NCDNQCIQWETARHGACHKRGGKWMCFCYFDRC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
47       55 KPSQTWTGK       5.731       Click here for PD Search       Click here for Cross-React search
46       54 EKPSQTWTG       4.963       Click here for PD Search       Click here for Cross-React search
57       65 GNTKNCDNQ       3.393       Click here for PD Search       Click here for Cross-React search
45       53 CEKPSQTWT       2.688       Click here for PD Search       Click here for Cross-React search
68       76 QWETARHGA       2.257       Click here for PD Search       Click here for Cross-React search
53       61 TGKCGNTKN       2.084       Click here for PD Search       Click here for Cross-React search
40       48 YPEALCEKP       1.849       Click here for PD Search       Click here for Cross-React search
58       66 NTKNCDNQC       1.838       Click here for PD Search       Click here for Cross-React search
34       42 TEGEVVYPE       1.824       Click here for PD Search       Click here for Cross-React search
42       50 EALCEKPSQ       1.771       Click here for PD Search       Click here for Cross-React search
27       35 AQGARAATE       1.61       Click here for PD Search       Click here for Cross-React search
41       49 PEALCEKPS       1.581       Click here for PD Search       Click here for Cross-React search
29       37 GARAATEGE       1.577       Click here for PD Search       Click here for Cross-React search
28       36 QGARAATEG       1.577       Click here for PD Search       Click here for Cross-React search
67       75 IQWETARHG       1.566       Click here for PD Search       Click here for Cross-React search
48       56 PSQTWTGKC       1.536       Click here for PD Search       Click here for Cross-React search
44       52 LCEKPSQTW       1.536       Click here for PD Search       Click here for Cross-React search
43       51 ALCEKPSQT       1.476       Click here for PD Search       Click here for Cross-React search
63       71 DNQCIQWET       1.465       Click here for PD Search       Click here for Cross-React search
72       80 ARHGACHKR       1.417       Click here for PD Search       Click here for Cross-React search
73       81 RHGACHKRG       1.388       Click here for PD Search       Click here for Cross-React search
52       60 WTGKCGNTK       1.362       Click here for PD Search       Click here for Cross-React search
3       11 PKASSLTLS       1.36       Click here for PD Search       Click here for Cross-React search
55       63 KCGNTKNCD       1.306       Click here for PD Search       Click here for Cross-React search
35       43 EGEVVYPEA       1.277       Click here for PD Search       Click here for Cross-React search
1       9 MAPKASSLT       1.23       Click here for PD Search       Click here for Cross-React search
30       38 ARAATEGEV       1.183       Click here for PD Search       Click here for Cross-React search
50       58 QTWTGKCGN       1.18       Click here for PD Search       Click here for Cross-React search
76       84 ACHKRGGKW       1.095       Click here for PD Search       Click here for Cross-React search
65       73 QCIQWETAR       1.08       Click here for PD Search       Click here for Cross-React search
78       86 HKRGGKWMC       1.073       Click here for PD Search       Click here for Cross-React search
77       85 CHKRGGKWM       1.073       Click here for PD Search       Click here for Cross-React search
33       41 ATEGEVVYP       1.064       Click here for PD Search       Click here for Cross-React search
56       64 CGNTKNCDN       1.05       Click here for PD Search       Click here for Cross-React search
71       79 TARHGACHK       1.044       Click here for PD Search       Click here for Cross-React search
75       83 GACHKRGGK       1.031       Click here for PD Search       Click here for Cross-React search
2       10 APKASSLTL       1.025       Click here for PD Search       Click here for Cross-React search
51       59 TWTGKCGNT       0.983       Click here for PD Search       Click here for Cross-React search
49       57 SQTWTGKCG       0.983       Click here for PD Search       Click here for Cross-React search
60       68 KNCDNQCIQ       0.961       Click here for PD Search       Click here for Cross-React search
70       78 ETARHGACH       0.904       Click here for PD Search       Click here for Cross-React search
4       12 KASSLTLSA       0.888       Click here for PD Search       Click here for Cross-React search
39       47 VYPEALCEK       0.888       Click here for PD Search       Click here for Cross-React search
64       72 NQCIQWETA       0.887       Click here for PD Search       Click here for Cross-React search
31       39 RAATEGEVV       0.869       Click here for PD Search       Click here for Cross-React search
66       74 CIQWETARH       0.848       Click here for PD Search       Click here for Cross-React search
59       67 TKNCDNQCI       0.801       Click here for PD Search       Click here for Cross-React search
54       62 GKCGNTKNC       0.774       Click here for PD Search       Click here for Cross-React search
74       82 HGACHKRGG       0.701       Click here for PD Search       Click here for Cross-React search
69       77 WETARHGAC       0.699       Click here for PD Search       Click here for Cross-React search
32       40 AATEGEVVY       0.695       Click here for PD Search       Click here for Cross-React search
26       34 VAQGARAAT       0.69       Click here for PD Search       Click here for Cross-React search
79       87 KRGGKWMCF       0.683       Click here for PD Search       Click here for Cross-React search
36       44 GEVVYPEAL       0.608       Click here for PD Search       Click here for Cross-React search
62       70 CDNQCIQWE       0.544       Click here for PD Search       Click here for Cross-React search
61       69 NCDNQCIQW       0.505       Click here for PD Search       Click here for Cross-React search
20       28 ASYSVGVAQ       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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