List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MKASYIAVCTLLVLLLAKTEVTMAVTCNPTQLSPCVGAITSSNPPSSLCCSKIKEQKPCL
CQYLKNPNLKKFVDSPNARKVANTCGTPFPKC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
63       71 YLKNPNLKK       5.421       Click here for PD Search       Click here for Cross-React search
62       70 QYLKNPNLK       4.695       Click here for PD Search       Click here for Cross-React search
64       72 LKNPNLKKF       2.996       Click here for PD Search       Click here for Cross-React search
51       59 SKIKEQKPC       2.971       Click here for PD Search       Click here for Cross-React search
50       58 CSKIKEQKP       2.971       Click here for PD Search       Click here for Cross-React search
76       84 PNARKVANT       2.724       Click here for PD Search       Click here for Cross-React search
65       73 KNPNLKKFV       2.696       Click here for PD Search       Click here for Cross-React search
74       82 DSPNARKVA       2.626       Click here for PD Search       Click here for Cross-React search
75       83 SPNARKVAN       2.529       Click here for PD Search       Click here for Cross-React search
40       48 TSSNPPSSL       2.348       Click here for PD Search       Click here for Cross-React search
70       78 KKFVDSPNA       2.299       Click here for PD Search       Click here for Cross-React search
66       74 NPNLKKFVD       2.252       Click here for PD Search       Click here for Cross-React search
72       80 FVDSPNARK       2.251       Click here for PD Search       Click here for Cross-React search
71       79 KFVDSPNAR       2.251       Click here for PD Search       Click here for Cross-React search
39       47 ITSSNPPSS       1.996       Click here for PD Search       Click here for Cross-React search
73       81 VDSPNARKV       1.93       Click here for PD Search       Click here for Cross-React search
69       77 LKKFVDSPN       1.876       Click here for PD Search       Click here for Cross-React search
68       76 NLKKFVDSP       1.876       Click here for PD Search       Click here for Cross-React search
67       75 PNLKKFVDS       1.876       Click here for PD Search       Click here for Cross-React search
52       60 KIKEQKPCL       1.828       Click here for PD Search       Click here for Cross-React search
38       46 AITSSNPPS       1.504       Click here for PD Search       Click here for Cross-React search
26       34 TCNPTQLSP       1.307       Click here for PD Search       Click here for Cross-React search
61       69 CQYLKNPNL       1.258       Click here for PD Search       Click here for Cross-React search
60       68 LCQYLKNPN       1.258       Click here for PD Search       Click here for Cross-React search
54       62 KEQKPCLCQ       1.211       Click here for PD Search       Click here for Cross-React search
83       91 NTCGTPFPK       1.17       Click here for PD Search       Click here for Cross-React search
37       45 GAITSSNPP       1.111       Click here for PD Search       Click here for Cross-React search
49       57 CCSKIKEQK       1.03       Click here for PD Search       Click here for Cross-React search
55       63 EQKPCLCQY       0.949       Click here for PD Search       Click here for Cross-React search
77       85 NARKVANTC       0.944       Click here for PD Search       Click here for Cross-React search
18       26 KTEVTMAVT       0.912       Click here for PD Search       Click here for Cross-React search
41       49 SSNPPSSLC       0.872       Click here for PD Search       Click here for Cross-React search
79       87 RKVANTCGT       0.83       Click here for PD Search       Click here for Cross-React search
16       24 LAKTEVTMA       0.709       Click here for PD Search       Click here for Cross-React search
28       36 NPTQLSPCV       0.672       Click here for PD Search       Click here for Cross-React search
80       88 KVANTCGTP       0.655       Click here for PD Search       Click here for Cross-React search
17       25 AKTEVTMAV       0.638       Click here for PD Search       Click here for Cross-React search
25       33 VTCNPTQLS       0.627       Click here for PD Search       Click here for Cross-React search
82       90 ANTCGTPFP       0.591       Click here for PD Search       Click here for Cross-React search
78       86 ARKVANTCG       0.581       Click here for PD Search       Click here for Cross-React search
15       23 LLAKTEVTM       0.579       Click here for PD Search       Click here for Cross-React search
23       31 MAVTCNPTQ       0.567       Click here for PD Search       Click here for Cross-React search
36       44 VGAITSSNP       0.533       Click here for PD Search       Click here for Cross-React search
57       65 KPCLCQYLK       0.522       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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