List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

EFTNTCMECLVCDVHVACGDFASNDVIDPAKFRRLGINDCLVNDGKSIEPSFPVSFQYGN
SFPYPMTVASASCDCN

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
57       65 QYGNSFPYP       3.933       Click here for PD Search       Click here for Cross-React search
43       51 NDGKSIEPS       3.753       Click here for PD Search       Click here for Cross-React search
28       36 DPAKFRRLG       2.963       Click here for PD Search       Click here for Cross-React search
58       66 YGNSFPYPM       2.247       Click here for PD Search       Click here for Cross-React search
56       64 FQYGNSFPY       2.202       Click here for PD Search       Click here for Cross-React search
31       39 KFRRLGIND       2.138       Click here for PD Search       Click here for Cross-React search
27       35 IDPAKFRRL       2.098       Click here for PD Search       Click here for Cross-React search
42       50 VNDGKSIEP       2.079       Click here for PD Search       Click here for Cross-React search
59       67 GNSFPYPMT       2.07       Click here for PD Search       Click here for Cross-React search
23       31 SNDVIDPAK       2.046       Click here for PD Search       Click here for Cross-React search
44       52 DGKSIEPSF       2.021       Click here for PD Search       Click here for Cross-React search
26       34 VIDPAKFRR       1.889       Click here for PD Search       Click here for Cross-React search
55       63 SFQYGNSFP       1.884       Click here for PD Search       Click here for Cross-React search
45       53 GKSIEPSFP       1.871       Click here for PD Search       Click here for Cross-React search
53       61 PVSFQYGNS       1.614       Click here for PD Search       Click here for Cross-React search
25       33 DVIDPAKFR       1.61       Click here for PD Search       Click here for Cross-React search
60       68 NSFPYPMTV       1.552       Click here for PD Search       Click here for Cross-React search
49       57 EPSFPVSFQ       1.501       Click here for PD Search       Click here for Cross-React search
46       54 KSIEPSFPV       1.403       Click here for PD Search       Click here for Cross-React search
50       58 PSFPVSFQY       1.358       Click here for PD Search       Click here for Cross-React search
24       32 NDVIDPAKF       1.322       Click here for PD Search       Click here for Cross-React search
30       38 AKFRRLGIN       1.293       Click here for PD Search       Click here for Cross-React search
29       37 PAKFRRLGI       1.244       Click here for PD Search       Click here for Cross-React search
63       71 PYPMTVASA       1.138       Click here for PD Search       Click here for Cross-React search
41       49 LVNDGKSIE       1.109       Click here for PD Search       Click here for Cross-React search
52       60 FPVSFQYGN       1.043       Click here for PD Search       Click here for Cross-React search
22       30 ASNDVIDPA       1.034       Click here for PD Search       Click here for Cross-React search
64       72 YPMTVASAS       0.986       Click here for PD Search       Click here for Cross-React search
38       46 NDCLVNDGK       0.981       Click here for PD Search       Click here for Cross-React search
62       70 FPYPMTVAS       0.975       Click here for PD Search       Click here for Cross-React search
61       69 SFPYPMTVA       0.975       Click here for PD Search       Click here for Cross-React search
20       28 DFASNDVID       0.957       Click here for PD Search       Click here for Cross-React search
47       55 SIEPSFPVS       0.94       Click here for PD Search       Click here for Cross-React search
54       62 VSFQYGNSF       0.904       Click here for PD Search       Click here for Cross-React search
21       29 FASNDVIDP       0.886       Click here for PD Search       Click here for Cross-React search
51       59 SFPVSFQYG       0.869       Click here for PD Search       Click here for Cross-React search
39       47 DCLVNDGKS       0.817       Click here for PD Search       Click here for Cross-React search
48       56 IEPSFPVSF       0.608       Click here for PD Search       Click here for Cross-React search
17       25 ACGDFASND       0.59       Click here for PD Search       Click here for Cross-React search
32       40 FRRLGINDC       0.573       Click here for PD Search       Click here for Cross-React search
19       27 GDFASNDVI       0.567       Click here for PD Search       Click here for Cross-React search
33       41 RRLGINDCL       0.546       Click here for PD Search       Click here for Cross-React search
1       9 EFTNTCMEC       0.518       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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