List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPG
VNPNNAAALPGKCGVSIPYKISASTNCATVK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
39       47 RTTPDRQAA       6.991       Click here for PD Search       Click here for Cross-React search
38       46 ARTTPDRQA       6.991       Click here for PD Search       Click here for Cross-React search
37       45 LARTTPDRQ       5.707       Click here for PD Search       Click here for Cross-React search
36       44 NLARTTPDR       5.299       Click here for PD Search       Click here for Cross-React search
35       43 NNLARTTPD       4.351       Click here for PD Search       Click here for Cross-React search
78       86 PYKISASTN       2.742       Click here for PD Search       Click here for Cross-React search
32       40 RNVNNLART       2.729       Click here for PD Search       Click here for Cross-React search
41       49 TPDRQAACN       2.132       Click here for PD Search       Click here for Cross-React search
33       41 NVNNLARTT       2.011       Click here for PD Search       Click here for Cross-React search
34       42 VNNLARTTP       1.934       Click here for PD Search       Click here for Cross-React search
40       48 TTPDRQAAC       1.913       Click here for PD Search       Click here for Cross-React search
62       70 NPNNAAALP       1.621       Click here for PD Search       Click here for Cross-React search
59       67 PGVNPNNAA       1.429       Click here for PD Search       Click here for Cross-React search
57       65 SVPGVNPNN       1.393       Click here for PD Search       Click here for Cross-React search
31       39 IRNVNNLAR       1.326       Click here for PD Search       Click here for Cross-React search
64       72 NNAAALPGK       1.29       Click here for PD Search       Click here for Cross-React search
77       85 IPYKISAST       1.195       Click here for PD Search       Click here for Cross-React search
52       60 KQLSASVPG       1.128       Click here for PD Search       Click here for Cross-React search
76       84 SIPYKISAS       1.11       Click here for PD Search       Click here for Cross-React search
29       37 NGIRNVNNL       1.066       Click here for PD Search       Click here for Cross-React search
58       66 VPGVNPNNA       1.05       Click here for PD Search       Click here for Cross-React search
63       71 PNNAAALPG       0.997       Click here for PD Search       Click here for Cross-React search
79       87 YKISASTNC       0.95       Click here for PD Search       Click here for Cross-React search
51       59 LKQLSASVP       0.94       Click here for PD Search       Click here for Cross-React search
60       68 GVNPNNAAA       0.934       Click here for PD Search       Click here for Cross-React search
56       64 ASVPGVNPN       0.875       Click here for PD Search       Click here for Cross-React search
42       50 PDRQAACNC       0.792       Click here for PD Search       Click here for Cross-React search
61       69 VNPNNAAAL       0.778       Click here for PD Search       Click here for Cross-React search
4       12 GQVSSSLAP       0.756       Click here for PD Search       Click here for Cross-React search
55       63 SASVPGVNP       0.729       Click here for PD Search       Click here for Cross-React search
49       57 NCLKQLSAS       0.706       Click here for PD Search       Click here for Cross-React search
83       91 ASTNCATVK       0.699       Click here for PD Search       Click here for Cross-React search
28       36 CNGIRNVNN       0.693       Click here for PD Search       Click here for Cross-React search
72       80 KCGVSIPYK       0.687       Click here for PD Search       Click here for Cross-React search
30       38 GIRNVNNLA       0.67       Click here for PD Search       Click here for Cross-React search
18       26 RGGGAVPPA       0.659       Click here for PD Search       Click here for Cross-React search
75       83 VSIPYKISA       0.615       Click here for PD Search       Click here for Cross-React search
80       88 KISASTNCA       0.613       Click here for PD Search       Click here for Cross-React search
74       82 GVSIPYKIS       0.602       Click here for PD Search       Click here for Cross-React search
44       52 RQAACNCLK       0.506       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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