List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MNNEKNVSFEFIGSTNEVDEIKVMACYAAGSICGEKRGYCCTNPGRYCPWQVVCYESRKI
CAKNAAKMRMNVTKNTI

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
2       10 NNEKNVSFE       3.716       Click here for PD Search       Click here for Cross-React search
67       75 KMRMNVTKN       3.676       Click here for PD Search       Click here for Cross-React search
63       71 KNAAKMRMN       3.502       Click here for PD Search       Click here for Cross-React search
14       22 STNEVDEIK       2.804       Click here for PD Search       Click here for Cross-React search
68       76 MRMNVTKNT       2.653       Click here for PD Search       Click here for Cross-React search
66       74 AKMRMNVTK       2.309       Click here for PD Search       Click here for Cross-React search
62       70 AKNAAKMRM       2.2       Click here for PD Search       Click here for Cross-React search
1       9 MNNEKNVSF       2.124       Click here for PD Search       Click here for Cross-React search
3       11 NEKNVSFEF       2.001       Click here for PD Search       Click here for Cross-React search
43       51 NPGRYCPWQ       1.972       Click here for PD Search       Click here for Cross-React search
56       64 ESRKICAKN       1.92       Click here for PD Search       Click here for Cross-React search
69       77 RMNVTKNTI       1.879       Click here for PD Search       Click here for Cross-React search
55       63 YESRKICAK       1.87       Click here for PD Search       Click here for Cross-React search
42       50 TNPGRYCPW       1.643       Click here for PD Search       Click here for Cross-React search
15       23 TNEVDEIKV       1.553       Click here for PD Search       Click here for Cross-React search
13       21 GSTNEVDEI       1.387       Click here for PD Search       Click here for Cross-React search
12       20 IGSTNEVDE       1.387       Click here for PD Search       Click here for Cross-React search
64       72 NAAKMRMNV       1.3       Click here for PD Search       Click here for Cross-React search
51       59 QVVCYESRK       1.26       Click here for PD Search       Click here for Cross-React search
35       43 EKRGYCCTN       1.213       Click here for PD Search       Click here for Cross-React search
61       69 CAKNAAKMR       1.192       Click here for PD Search       Click here for Cross-React search
65       73 AAKMRMNVT       1.167       Click here for PD Search       Click here for Cross-React search
57       65 SRKICAKNA       1.12       Click here for PD Search       Click here for Cross-React search
36       44 KRGYCCTNP       1.083       Click here for PD Search       Click here for Cross-React search
16       24 NEVDEIKVM       1.065       Click here for PD Search       Click here for Cross-React search
44       52 PGRYCPWQV       0.91       Click here for PD Search       Click here for Cross-React search
31       39 SICGEKRGY       0.907       Click here for PD Search       Click here for Cross-React search
4       12 EKNVSFEFI       0.872       Click here for PD Search       Click here for Cross-React search
59       67 KICAKNAAK       0.862       Click here for PD Search       Click here for Cross-React search
39       47 YCCTNPGRY       0.849       Click here for PD Search       Click here for Cross-React search
58       66 RKICAKNAA       0.844       Click here for PD Search       Click here for Cross-React search
9       17 FEFIGSTNE       0.839       Click here for PD Search       Click here for Cross-React search
41       49 CTNPGRYCP       0.838       Click here for PD Search       Click here for Cross-React search
34       42 GEKRGYCCT       0.747       Click here for PD Search       Click here for Cross-React search
10       18 EFIGSTNEV       0.719       Click here for PD Search       Click here for Cross-React search
11       19 FIGSTNEVD       0.694       Click here for PD Search       Click here for Cross-React search
17       25 EVDEIKVMA       0.669       Click here for PD Search       Click here for Cross-React search
50       58 WQVVCYESR       0.662       Click here for PD Search       Click here for Cross-React search
8       16 SFEFIGSTN       0.649       Click here for PD Search       Click here for Cross-React search
29       37 AGSICGEKR       0.585       Click here for PD Search       Click here for Cross-React search
30       38 GSICGEKRG       0.573       Click here for PD Search       Click here for Cross-React search
38       46 GYCCTNPGR       0.536       Click here for PD Search       Click here for Cross-React search
37       45 RGYCCTNPG       0.536       Click here for PD Search       Click here for Cross-React search
49       57 PWQVVCYES       0.523       Click here for PD Search       Click here for Cross-React search
52       60 VVCYESRKI       0.51       Click here for PD Search       Click here for Cross-React search
54       62 CYESRKICA       0.501       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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