List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

AGSKLCEKTSKTWSGKCDNKKCDKKCIEWEKAQHGACHKREAGKESCFCYFDCSKSPPGA
TPAPPGAAPPPAAGGSPPPPADGGSPPPPADGGSPPADGGSPPPPSAH

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
38       46 HKREAGKES       4.144       Click here for PD Search       Click here for Cross-React search
8       16 KTSKTWSGK       3.012       Click here for PD Search       Click here for Cross-React search
7       15 EKTSKTWSG       2.608       Click here for PD Search       Click here for Cross-React search
18       26 DNKKCDKKC       1.994       Click here for PD Search       Click here for Cross-React search
17       25 CDNKKCDKK       1.994       Click here for PD Search       Click here for Cross-React search
16       24 KCDNKKCDK       1.994       Click here for PD Search       Click here for Cross-React search
54       62 SKSPPGATP       1.854       Click here for PD Search       Click here for Cross-React search
37       45 CHKREAGKE       1.658       Click here for PD Search       Click here for Cross-React search
4       12 KLCEKTSKT       1.654       Click here for PD Search       Click here for Cross-React search
39       47 KREAGKESC       1.632       Click here for PD Search       Click here for Cross-React search
98       106 DGGSPPPPS       1.625       Click here for PD Search       Click here for Cross-React search
13       21 WSGKCDNKK       1.553       Click here for PD Search       Click here for Cross-React search
3       11 SKLCEKTSK       1.536       Click here for PD Search       Click here for Cross-React search
23       31 DKKCIEWEK       1.531       Click here for PD Search       Click here for Cross-React search
28       36 EWEKAQHGA       1.452       Click here for PD Search       Click here for Cross-React search
6       14 CEKTSKTWS       1.413       Click here for PD Search       Click here for Cross-React search
55       63 KSPPGATPA       1.397       Click here for PD Search       Click here for Cross-React search
100       108 GSPPPPSAH       1.351       Click here for PD Search       Click here for Cross-React search
57       65 PPGATPAPP       1.247       Click here for PD Search       Click here for Cross-React search
96       104 PADGGSPPP       1.225       Click here for PD Search       Click here for Cross-React search
95       103 PPADGGSPP       1.225       Click here for PD Search       Click here for Cross-React search
88       96 PPADGGSPP       1.225       Click here for PD Search       Click here for Cross-React search
87       95 PPPADGGSP       1.225       Click here for PD Search       Click here for Cross-React search
86       94 PPPPADGGS       1.225       Click here for PD Search       Click here for Cross-React search
85       93 SPPPPADGG       1.225       Click here for PD Search       Click here for Cross-React search
84       92 GSPPPPADG       1.225       Click here for PD Search       Click here for Cross-React search
83       91 GGSPPPPAD       1.225       Click here for PD Search       Click here for Cross-React search
82       90 DGGSPPPPA       1.225       Click here for PD Search       Click here for Cross-React search
81       89 ADGGSPPPP       1.225       Click here for PD Search       Click here for Cross-React search
80       88 PADGGSPPP       1.225       Click here for PD Search       Click here for Cross-React search
79       87 PPADGGSPP       1.225       Click here for PD Search       Click here for Cross-React search
78       86 PPPADGGSP       1.225       Click here for PD Search       Click here for Cross-React search
77       85 PPPPADGGS       1.225       Click here for PD Search       Click here for Cross-React search
76       84 SPPPPADGG       1.225       Click here for PD Search       Click here for Cross-React search
75       83 GSPPPPADG       1.225       Click here for PD Search       Click here for Cross-React search
74       82 GGSPPPPAD       1.225       Click here for PD Search       Click here for Cross-React search
97       105 ADGGSPPPP       1.225       Click here for PD Search       Click here for Cross-React search
33       41 QHGACHKRE       1.128       Click here for PD Search       Click here for Cross-React search
12       20 TWSGKCDNK       1.121       Click here for PD Search       Click here for Cross-React search
11       19 KTWSGKCDN       1.121       Click here for PD Search       Click here for Cross-React search
56       64 SPPGATPAP       1.08       Click here for PD Search       Click here for Cross-React search
94       102 SPPADGGSP       1.061       Click here for PD Search       Click here for Cross-React search
50       58 YFDCSKSPP       1.009       Click here for PD Search       Click here for Cross-React search
27       35 IEWEKAQHG       1.008       Click here for PD Search       Click here for Cross-React search
15       23 GKCDNKKCD       0.987       Click here for PD Search       Click here for Cross-React search
99       107 GGSPPPPSA       0.983       Click here for PD Search       Click here for Cross-React search
36       44 ACHKREAGK       0.967       Click here for PD Search       Click here for Cross-React search
10       18 SKTWSGKCD       0.934       Click here for PD Search       Click here for Cross-React search
24       32 KKCIEWEKA       0.926       Click here for PD Search       Click here for Cross-React search
20       28 KKCDKKCIE       0.902       Click here for PD Search       Click here for Cross-React search
64       72 PPGAAPPPA       0.873       Click here for PD Search       Click here for Cross-React search
63       71 APPGAAPPP       0.873       Click here for PD Search       Click here for Cross-React search
62       70 PAPPGAAPP       0.873       Click here for PD Search       Click here for Cross-React search
5       13 LCEKTSKTW       0.869       Click here for PD Search       Click here for Cross-React search
90       98 ADGGSPPAD       0.864       Click here for PD Search       Click here for Cross-React search
91       99 DGGSPPADG       0.847       Click here for PD Search       Click here for Cross-React search
19       27 NKKCDKKCI       0.837       Click here for PD Search       Click here for Cross-React search
61       69 TPAPPGAAP       0.814       Click here for PD Search       Click here for Cross-React search
9       17 TSKTWSGKC       0.807       Click here for PD Search       Click here for Cross-React search
25       33 KCIEWEKAQ       0.802       Click here for PD Search       Click here for Cross-React search
89       97 PADGGSPPA       0.8       Click here for PD Search       Click here for Cross-React search
58       66 PGATPAPPG       0.798       Click here for PD Search       Click here for Cross-React search
14       22 SGKCDNKKC       0.792       Click here for PD Search       Click here for Cross-React search
2       10 GSKLCEKTS       0.76       Click here for PD Search       Click here for Cross-React search
52       60 DCSKSPPGA       0.744       Click here for PD Search       Click here for Cross-React search
73       81 AGGSPPPPA       0.741       Click here for PD Search       Click here for Cross-React search
72       80 AAGGSPPPP       0.741       Click here for PD Search       Click here for Cross-React search
71       79 PAAGGSPPP       0.741       Click here for PD Search       Click here for Cross-React search
70       78 PPAAGGSPP       0.741       Click here for PD Search       Click here for Cross-React search
69       77 PPPAAGGSP       0.741       Click here for PD Search       Click here for Cross-React search
40       48 REAGKESCF       0.707       Click here for PD Search       Click here for Cross-React search
93       101 GSPPADGGS       0.679       Click here for PD Search       Click here for Cross-React search
31       39 KAQHGACHK       0.672       Click here for PD Search       Click here for Cross-React search
34       42 HGACHKREA       0.658       Click here for PD Search       Click here for Cross-React search
32       40 AQHGACHKR       0.658       Click here for PD Search       Click here for Cross-React search
53       61 CSKSPPGAT       0.643       Click here for PD Search       Click here for Cross-React search
51       59 FDCSKSPPG       0.637       Click here for PD Search       Click here for Cross-React search
30       38 EKAQHGACH       0.582       Click here for PD Search       Click here for Cross-React search
1       9 AGSKLCEKT       0.573       Click here for PD Search       Click here for Cross-React search
65       73 PGAAPPPAA       0.57       Click here for PD Search       Click here for Cross-React search
26       34 CIEWEKAQH       0.546       Click here for PD Search       Click here for Cross-React search
60       68 ATPAPPGAA       0.532       Click here for PD Search       Click here for Cross-React search
59       67 GATPAPPGA       0.521       Click here for PD Search       Click here for Cross-React search
92       100 GGSPPADGG       0.502       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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