List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

AGSKLCEKTSKTYSGKCDNKKCDKKCIEWEKAQHGACHKREAGKESCFCYFDCSKSPPGA
TPAPPGAAPPPAAGGSPPPPTDGGSPPPPADGGSPPADGGSPPPPSTH

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
8       16 KTSKTYSGK       4.004       Click here for PD Search       Click here for Cross-React search
38       46 HKREAGKES       3.697       Click here for PD Search       Click here for Cross-React search
7       15 EKTSKTYSG       3.467       Click here for PD Search       Click here for Cross-React search
13       21 YSGKCDNKK       2.065       Click here for PD Search       Click here for Cross-React search
6       14 CEKTSKTYS       1.878       Click here for PD Search       Click here for Cross-React search
18       26 DNKKCDKKC       1.779       Click here for PD Search       Click here for Cross-React search
17       25 CDNKKCDKK       1.779       Click here for PD Search       Click here for Cross-React search
16       24 KCDNKKCDK       1.779       Click here for PD Search       Click here for Cross-React search
100       108 GSPPPPSTH       1.722       Click here for PD Search       Click here for Cross-React search
54       62 SKSPPGATP       1.653       Click here for PD Search       Click here for Cross-React search
81       89 TDGGSPPPP       1.561       Click here for PD Search       Click here for Cross-React search
80       88 PTDGGSPPP       1.561       Click here for PD Search       Click here for Cross-React search
79       87 PPTDGGSPP       1.561       Click here for PD Search       Click here for Cross-React search
78       86 PPPTDGGSP       1.561       Click here for PD Search       Click here for Cross-React search
77       85 PPPPTDGGS       1.561       Click here for PD Search       Click here for Cross-React search
76       84 SPPPPTDGG       1.561       Click here for PD Search       Click here for Cross-React search
75       83 GSPPPPTDG       1.561       Click here for PD Search       Click here for Cross-React search
74       82 GGSPPPPTD       1.561       Click here for PD Search       Click here for Cross-React search
12       20 TYSGKCDNK       1.49       Click here for PD Search       Click here for Cross-React search
11       19 KTYSGKCDN       1.49       Click here for PD Search       Click here for Cross-React search
37       45 CHKREAGKE       1.479       Click here for PD Search       Click here for Cross-React search
4       12 KLCEKTSKT       1.475       Click here for PD Search       Click here for Cross-React search
39       47 KREAGKESC       1.456       Click here for PD Search       Click here for Cross-React search
98       106 DGGSPPPPS       1.449       Click here for PD Search       Click here for Cross-React search
3       11 SKLCEKTSK       1.37       Click here for PD Search       Click here for Cross-React search
23       31 DKKCIEWEK       1.366       Click here for PD Search       Click here for Cross-React search
28       36 EWEKAQHGA       1.295       Click here for PD Search       Click here for Cross-React search
99       107 GGSPPPPST       1.252       Click here for PD Search       Click here for Cross-React search
55       63 KSPPGATPA       1.246       Click here for PD Search       Click here for Cross-React search
10       18 SKTYSGKCD       1.242       Click here for PD Search       Click here for Cross-React search
5       13 LCEKTSKTY       1.156       Click here for PD Search       Click here for Cross-React search
57       65 PPGATPAPP       1.112       Click here for PD Search       Click here for Cross-React search
96       104 PADGGSPPP       1.092       Click here for PD Search       Click here for Cross-React search
95       103 PPADGGSPP       1.092       Click here for PD Search       Click here for Cross-React search
88       96 PPADGGSPP       1.092       Click here for PD Search       Click here for Cross-React search
87       95 PPPADGGSP       1.092       Click here for PD Search       Click here for Cross-React search
86       94 PPPPADGGS       1.092       Click here for PD Search       Click here for Cross-React search
85       93 SPPPPADGG       1.092       Click here for PD Search       Click here for Cross-React search
84       92 GSPPPPADG       1.092       Click here for PD Search       Click here for Cross-React search
83       91 GGSPPPPAD       1.092       Click here for PD Search       Click here for Cross-React search
82       90 DGGSPPPPA       1.092       Click here for PD Search       Click here for Cross-React search
97       105 ADGGSPPPP       1.092       Click here for PD Search       Click here for Cross-React search
9       17 TSKTYSGKC       1.073       Click here for PD Search       Click here for Cross-React search
33       41 QHGACHKRE       1.006       Click here for PD Search       Click here for Cross-React search
56       64 SPPGATPAP       0.964       Click here for PD Search       Click here for Cross-React search
94       102 SPPADGGSP       0.947       Click here for PD Search       Click here for Cross-React search
73       81 AGGSPPPPT       0.944       Click here for PD Search       Click here for Cross-React search
50       58 YFDCSKSPP       0.9       Click here for PD Search       Click here for Cross-React search
27       35 IEWEKAQHG       0.899       Click here for PD Search       Click here for Cross-React search
15       23 GKCDNKKCD       0.88       Click here for PD Search       Click here for Cross-React search
36       44 ACHKREAGK       0.863       Click here for PD Search       Click here for Cross-React search
24       32 KKCIEWEKA       0.826       Click here for PD Search       Click here for Cross-React search
20       28 KKCDKKCIE       0.804       Click here for PD Search       Click here for Cross-React search
64       72 PPGAAPPPA       0.778       Click here for PD Search       Click here for Cross-React search
63       71 APPGAAPPP       0.778       Click here for PD Search       Click here for Cross-React search
62       70 PAPPGAAPP       0.778       Click here for PD Search       Click here for Cross-React search
90       98 ADGGSPPAD       0.771       Click here for PD Search       Click here for Cross-React search
91       99 DGGSPPADG       0.755       Click here for PD Search       Click here for Cross-React search
19       27 NKKCDKKCI       0.747       Click here for PD Search       Click here for Cross-React search
61       69 TPAPPGAAP       0.727       Click here for PD Search       Click here for Cross-React search
25       33 KCIEWEKAQ       0.716       Click here for PD Search       Click here for Cross-React search
89       97 PADGGSPPA       0.714       Click here for PD Search       Click here for Cross-React search
58       66 PGATPAPPG       0.712       Click here for PD Search       Click here for Cross-React search
14       22 SGKCDNKKC       0.706       Click here for PD Search       Click here for Cross-React search
2       10 GSKLCEKTS       0.678       Click here for PD Search       Click here for Cross-React search
52       60 DCSKSPPGA       0.663       Click here for PD Search       Click here for Cross-React search
72       80 AAGGSPPPP       0.661       Click here for PD Search       Click here for Cross-React search
71       79 PAAGGSPPP       0.661       Click here for PD Search       Click here for Cross-React search
70       78 PPAAGGSPP       0.661       Click here for PD Search       Click here for Cross-React search
69       77 PPPAAGGSP       0.661       Click here for PD Search       Click here for Cross-React search
40       48 REAGKESCF       0.631       Click here for PD Search       Click here for Cross-React search
93       101 GSPPADGGS       0.606       Click here for PD Search       Click here for Cross-React search
31       39 KAQHGACHK       0.599       Click here for PD Search       Click here for Cross-React search
34       42 HGACHKREA       0.587       Click here for PD Search       Click here for Cross-React search
32       40 AQHGACHKR       0.587       Click here for PD Search       Click here for Cross-React search
53       61 CSKSPPGAT       0.573       Click here for PD Search       Click here for Cross-React search
51       59 FDCSKSPPG       0.569       Click here for PD Search       Click here for Cross-React search
30       38 EKAQHGACH       0.519       Click here for PD Search       Click here for Cross-React search
1       9 AGSKLCEKT       0.511       Click here for PD Search       Click here for Cross-React search
65       73 PGAAPPPAA       0.509       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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