List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

ARQLNPSDQELQSPQQLYPQQPYPQQPY

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
20       28 QQPYPQQPY       2.049       Click here for PD Search       Click here for Cross-React search
18       26 YPQQPYPQQ       2.049       Click here for PD Search       Click here for Cross-React search
19       27 PQQPYPQQP       2.022       Click here for PD Search       Click here for Cross-React search
2       10 RQLNPSDQE       1.172       Click here for PD Search       Click here for Cross-React search
8       16 DQELQSPQQ       1.116       Click here for PD Search       Click here for Cross-React search
15       23 QQLYPQQPY       1.093       Click here for PD Search       Click here for Cross-React search
14       22 PQQLYPQQP       1.078       Click here for PD Search       Click here for Cross-React search
17       25 LYPQQPYPQ       0.976       Click here for PD Search       Click here for Cross-React search
16       24 QLYPQQPYP       0.976       Click here for PD Search       Click here for Cross-React search
13       21 SPQQLYPQQ       0.935       Click here for PD Search       Click here for Cross-React search
12       20 QSPQQLYPQ       0.935       Click here for PD Search       Click here for Cross-React search
7       15 SDQELQSPQ       0.863       Click here for PD Search       Click here for Cross-React search
5       13 NPSDQELQS       0.802       Click here for PD Search       Click here for Cross-React search
6       14 PSDQELQSP       0.771       Click here for PD Search       Click here for Cross-React search
1       9 ARQLNPSDQ       0.683       Click here for PD Search       Click here for Cross-React search
9       17 QELQSPQQL       0.551       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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