List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

DDFRNEFDRLLIHMTEEQFAKLEQALAHLSHQVTELEKSKSKELKAQILREISIGLDFID
SAKGHFERELKRADLNLAEKFNFESALSTGAVLHKDLTALATKVKAIETK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
37       45 EKSKSKELK       6.508       Click here for PD Search       Click here for Cross-React search
35       43 ELEKSKSKE       5.636       Click here for PD Search       Click here for Cross-React search
34       42 TELEKSKSK       4.697       Click here for PD Search       Click here for Cross-React search
38       46 KSKSKELKA       3.797       Click here for PD Search       Click here for Cross-React search
1       9 DDFRNEFDR       3.418       Click here for PD Search       Click here for Cross-React search
39       47 SKSKELKAQ       3.288       Click here for PD Search       Click here for Cross-React search
36       44 LEKSKSKEL       2.684       Click here for PD Search       Click here for Cross-React search
66       74 FERELKRAD       2.539       Click here for PD Search       Click here for Cross-React search
67       75 ERELKRADL       2.418       Click here for PD Search       Click here for Cross-React search
32       40 QVTELEKSK       2.253       Click here for PD Search       Click here for Cross-React search
68       76 RELKRADLN       2.246       Click here for PD Search       Click here for Cross-React search
65       73 HFERELKRA       2.069       Click here for PD Search       Click here for Cross-React search
63       71 KGHFERELK       2.069       Click here for PD Search       Click here for Cross-React search
16       24 EEQFAKLEQ       2.059       Click here for PD Search       Click here for Cross-React search
64       72 GHFERELKR       2.027       Click here for PD Search       Click here for Cross-React search
33       41 VTELEKSKS       1.743       Click here for PD Search       Click here for Cross-React search
40       48 KSKELKAQI       1.72       Click here for PD Search       Click here for Cross-React search
15       23 TEEQFAKLE       1.716       Click here for PD Search       Click here for Cross-React search
61       69 SAKGHFERE       1.699       Click here for PD Search       Click here for Cross-React search
2       10 DFRNEFDRL       1.688       Click here for PD Search       Click here for Cross-React search
60       68 DSAKGHFER       1.638       Click here for PD Search       Click here for Cross-React search
13       21 HMTEEQFAK       1.618       Click here for PD Search       Click here for Cross-React search
31       39 HQVTELEKS       1.533       Click here for PD Search       Click here for Cross-React search
30       38 SHQVTELEK       1.533       Click here for PD Search       Click here for Cross-React search
102       110 TKVKAIETK       1.389       Click here for PD Search       Click here for Cross-React search
17       25 EQFAKLEQA       1.201       Click here for PD Search       Click here for Cross-React search
72       80 RADLNLAEK       1.158       Click here for PD Search       Click here for Cross-React search
71       79 KRADLNLAE       1.158       Click here for PD Search       Click here for Cross-React search
62       70 AKGHFEREL       1.045       Click here for PD Search       Click here for Cross-React search
42       50 KELKAQILR       1.036       Click here for PD Search       Click here for Cross-React search
14       22 MTEEQFAKL       0.98       Click here for PD Search       Click here for Cross-React search
69       77 ELKRADLNL       0.946       Click here for PD Search       Click here for Cross-React search
78       86 AEKFNFESA       0.906       Click here for PD Search       Click here for Cross-React search
43       51 ELKAQILRE       0.898       Click here for PD Search       Click here for Cross-React search
76       84 NLAEKFNFE       0.888       Click here for PD Search       Click here for Cross-React search
95       103 KDLTALATK       0.884       Click here for PD Search       Click here for Cross-React search
3       11 FRNEFDRLL       0.833       Click here for PD Search       Click here for Cross-React search
74       82 DLNLAEKFN       0.815       Click here for PD Search       Click here for Cross-React search
79       87 EKFNFESAL       0.74       Click here for PD Search       Click here for Cross-React search
77       85 LAEKFNFES       0.74       Click here for PD Search       Click here for Cross-React search
41       49 SKELKAQIL       0.709       Click here for PD Search       Click here for Cross-React search
101       109 ATKVKAIET       0.702       Click here for PD Search       Click here for Cross-React search
4       12 RNEFDRLLI       0.675       Click here for PD Search       Click here for Cross-React search
29       37 LSHQVTELE       0.632       Click here for PD Search       Click here for Cross-React search
27       35 AHLSHQVTE       0.608       Click here for PD Search       Click here for Cross-React search
94       102 HKDLTALAT       0.602       Click here for PD Search       Click here for Cross-React search
45       53 KAQILREIS       0.59       Click here for PD Search       Click here for Cross-React search
59       67 IDSAKGHFE       0.586       Click here for PD Search       Click here for Cross-React search
80       88 KFNFESALS       0.572       Click here for PD Search       Click here for Cross-React search
18       26 QFAKLEQAL       0.572       Click here for PD Search       Click here for Cross-React search
12       20 IHMTEEQFA       0.567       Click here for PD Search       Click here for Cross-React search
57       65 DFIDSAKGH       0.565       Click here for PD Search       Click here for Cross-React search
70       78 LKRADLNLA       0.552       Click here for PD Search       Click here for Cross-React search
20       28 AKLEQALAH       0.524       Click here for PD Search       Click here for Cross-React search
73       81 ADLNLAEKF       0.512       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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