List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

EQLTKCEVFRELKDLKGYGGVSLPEWVCTAFHTSGYDTQAIVQNNDSTEYGLFQINNKIW
CKDDQNPHSSNICNISCDKFLDDDLTDDIMCVKKILDKVGINYWLAHKALCSEKLDQWLC
EKL


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
62       70 KDDQNPHSS       7.926       Click here for PD Search       Click here for Cross-React search
63       71 DDQNPHSSN       6.373       Click here for PD Search       Click here for Cross-React search
43       51 QNNDSTEYG       5.245       Click here for PD Search       Click here for Cross-React search
42       50 VQNNDSTEY       3.934       Click here for PD Search       Click here for Cross-React search
10       18 RELKDLKGY       3.226       Click here for PD Search       Click here for Cross-React search
61       69 CKDDQNPHS       3.17       Click here for PD Search       Click here for Cross-React search
64       72 DQNPHSSNI       2.675       Click here for PD Search       Click here for Cross-React search
44       52 NNDSTEYGL       2.498       Click here for PD Search       Click here for Cross-React search
60       68 WCKDDQNPH       2.487       Click here for PD Search       Click here for Cross-React search
32       40 HTSGYDTQA       2.324       Click here for PD Search       Click here for Cross-React search
31       39 FHTSGYDTQ       1.992       Click here for PD Search       Click here for Cross-React search
79       87 KFLDDDLTD       1.785       Click here for PD Search       Click here for Cross-React search
78       86 DKFLDDDLT       1.785       Click here for PD Search       Click here for Cross-React search
9       17 FRELKDLKG       1.783       Click here for PD Search       Click here for Cross-React search
41       49 IVQNNDSTE       1.76       Click here for PD Search       Click here for Cross-React search
58       66 KIWCKDDQN       1.657       Click here for PD Search       Click here for Cross-React search
57       65 NKIWCKDDQ       1.657       Click here for PD Search       Click here for Cross-React search
11       19 ELKDLKGYG       1.63       Click here for PD Search       Click here for Cross-React search
56       64 NNKIWCKDD       1.539       Click here for PD Search       Click here for Cross-React search
80       88 FLDDDLTDD       1.491       Click here for PD Search       Click here for Cross-React search
82       90 DDDLTDDIM       1.448       Click here for PD Search       Click here for Cross-React search
46       54 DSTEYGLFQ       1.448       Click here for PD Search       Click here for Cross-React search
45       53 NDSTEYGLF       1.345       Click here for PD Search       Click here for Cross-React search
8       16 VFRELKDLK       1.337       Click here for PD Search       Click here for Cross-React search
38       46 TQAIVQNND       1.327       Click here for PD Search       Click here for Cross-React search
37       45 DTQAIVQNN       1.327       Click here for PD Search       Click here for Cross-React search
36       44 YDTQAIVQN       1.293       Click here for PD Search       Click here for Cross-React search
59       67 IWCKDDQNP       1.281       Click here for PD Search       Click here for Cross-React search
39       47 QAIVQNNDS       1.232       Click here for PD Search       Click here for Cross-React search
81       89 LDDDLTDDI       1.207       Click here for PD Search       Click here for Cross-React search
33       41 TSGYDTQAI       1.197       Click here for PD Search       Click here for Cross-React search
30       38 AFHTSGYDT       1.162       Click here for PD Search       Click here for Cross-React search
29       37 TAFHTSGYD       1.162       Click here for PD Search       Click here for Cross-React search
7       15 EVFRELKDL       1.158       Click here for PD Search       Click here for Cross-React search
76       84 SCDKFLDDD       1.077       Click here for PD Search       Click here for Cross-React search
114       122 KLDQWLCEK       1.037       Click here for PD Search       Click here for Cross-React search
40       48 AIVQNNDST       1.027       Click here for PD Search       Click here for Cross-React search
50       58 YGLFQINNK       0.939       Click here for PD Search       Click here for Cross-React search
12       20 LKDLKGYGG       0.931       Click here for PD Search       Click here for Cross-React search
5       13 KCEVFRELK       0.901       Click here for PD Search       Click here for Cross-React search
113       121 EKLDQWLCE       0.898       Click here for PD Search       Click here for Cross-React search
65       73 QNPHSSNIC       0.859       Click here for PD Search       Click here for Cross-React search
13       21 KDLKGYGGV       0.838       Click here for PD Search       Click here for Cross-React search
49       57 EYGLFQINN       0.813       Click here for PD Search       Click here for Cross-React search
66       74 NPHSSNICN       0.797       Click here for PD Search       Click here for Cross-React search
35       43 GYDTQAIVQ       0.796       Click here for PD Search       Click here for Cross-React search
108       116 KALCSEKLD       0.771       Click here for PD Search       Click here for Cross-React search
106       114 AHKALCSEK       0.769       Click here for PD Search       Click here for Cross-React search
6       14 CEVFRELKD       0.753       Click here for PD Search       Click here for Cross-React search
48       56 TEYGLFQIN       0.73       Click here for PD Search       Click here for Cross-React search
112       120 SEKLDQWLC       0.695       Click here for PD Search       Click here for Cross-React search
111       119 CSEKLDQWL       0.695       Click here for PD Search       Click here for Cross-React search
110       118 LCSEKLDQW       0.695       Click here for PD Search       Click here for Cross-React search
102       110 NYWLAHKAL       0.676       Click here for PD Search       Click here for Cross-React search
54       62 QINNKIWCK       0.67       Click here for PD Search       Click here for Cross-React search
109       117 ALCSEKLDQ       0.668       Click here for PD Search       Click here for Cross-React search
77       85 CDKFLDDDL       0.663       Click here for PD Search       Click here for Cross-React search
4       12 TKCEVFREL       0.65       Click here for PD Search       Click here for Cross-React search
3       11 LTKCEVFRE       0.65       Click here for PD Search       Click here for Cross-React search
2       10 QLTKCEVFR       0.65       Click here for PD Search       Click here for Cross-React search
55       63 INNKIWCKD       0.646       Click here for PD Search       Click here for Cross-React search
107       115 HKALCSEKL       0.628       Click here for PD Search       Click here for Cross-React search
34       42 SGYDTQAIV       0.616       Click here for PD Search       Click here for Cross-React search
47       55 STEYGLFQI       0.608       Click here for PD Search       Click here for Cross-React search
86       94 TDDIMCVKK       0.6       Click here for PD Search       Click here for Cross-React search
1       9 EQLTKCEVF       0.575       Click here for PD Search       Click here for Cross-React search
101       109 INYWLAHKA       0.574       Click here for PD Search       Click here for Cross-React search
92       100 VKKILDKVG       0.568       Click here for PD Search       Click here for Cross-React search
100       108 GINYWLAHK       0.563       Click here for PD Search       Click here for Cross-React search
14       22 DLKGYGGVS       0.562       Click here for PD Search       Click here for Cross-React search
93       101 KKILDKVGI       0.537       Click here for PD Search       Click here for Cross-React search
16       24 KGYGGVSLP       0.52       Click here for PD Search       Click here for Cross-React search
96       104 LDKVGINYW       0.507       Click here for PD Search       Click here for Cross-React search
97       105 DKVGINYWL       0.507       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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