List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

IPKVPPGPNITATYGDKWLDAKSTWYGKPTGAGP

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
22       30 KSTWYGKPT       2.401       Click here for PD Search       Click here for Cross-React search
20       28 DAKSTWYGK       1.815       Click here for PD Search       Click here for Cross-React search
21       29 AKSTWYGKP       1.681       Click here for PD Search       Click here for Cross-React search
16       24 DKWLDAKST       1.612       Click here for PD Search       Click here for Cross-React search
14       22 YGDKWLDAK       1.292       Click here for PD Search       Click here for Cross-React search
23       31 STWYGKPTG       1.188       Click here for PD Search       Click here for Cross-React search
15       23 GDKWLDAKS       1.105       Click here for PD Search       Click here for Cross-React search
9       17 NITATYGDK       1.048       Click here for PD Search       Click here for Cross-React search
17       25 KWLDAKSTW       1.015       Click here for PD Search       Click here for Cross-React search
13       21 TYGDKWLDA       0.933       Click here for PD Search       Click here for Cross-React search
12       20 ATYGDKWLD       0.933       Click here for PD Search       Click here for Cross-React search
26       34 YGKPTGAGP       0.903       Click here for PD Search       Click here for Cross-React search
24       32 TWYGKPTGA       0.896       Click here for PD Search       Click here for Cross-React search
8       16 PNITATYGD       0.81       Click here for PD Search       Click here for Cross-React search
2       10 PKVPPGPNI       0.808       Click here for PD Search       Click here for Cross-React search
1       9 IPKVPPGPN       0.808       Click here for PD Search       Click here for Cross-React search
11       19 TATYGDKWL       0.806       Click here for PD Search       Click here for Cross-React search
18       26 WLDAKSTWY       0.795       Click here for PD Search       Click here for Cross-React search
3       11 KVPPGPNIT       0.754       Click here for PD Search       Click here for Cross-React search
6       14 PGPNITATY       0.75       Click here for PD Search       Click here for Cross-React search
19       27 LDAKSTWYG       0.748       Click here for PD Search       Click here for Cross-React search
5       13 PPGPNITAT       0.74       Click here for PD Search       Click here for Cross-React search
10       18 ITATYGDKW       0.685       Click here for PD Search       Click here for Cross-React search
25       33 WYGKPTGAG       0.614       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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