List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

KTVAGFCIFFLVLFLAQEGVVKTEAKLCNHLADTYRGPCFTNASCDDHCKNKEHFVSGTC
MKMACWCAHNC

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
46       54 DDHCKNKEH       6.739       Click here for PD Search       Click here for Cross-React search
47       55 DHCKNKEHF       3.495       Click here for PD Search       Click here for Cross-React search
29       37 NHLADTYRG       2.917       Click here for PD Search       Click here for Cross-React search
50       58 KNKEHFVSG       2.824       Click here for PD Search       Click here for Cross-React search
30       38 HLADTYRGP       2.805       Click here for PD Search       Click here for Cross-React search
45       53 CDDHCKNKE       2.655       Click here for PD Search       Click here for Cross-React search
22       30 KTEAKLCNH       2.135       Click here for PD Search       Click here for Cross-React search
18       26 EGVVKTEAK       2.084       Click here for PD Search       Click here for Cross-React search
44       52 SCDDHCKNK       2.054       Click here for PD Search       Click here for Cross-React search
51       59 NKEHFVSGT       2.038       Click here for PD Search       Click here for Cross-React search
17       25 QEGVVKTEA       1.805       Click here for PD Search       Click here for Cross-React search
16       24 AQEGVVKTE       1.805       Click here for PD Search       Click here for Cross-React search
33       41 DTYRGPCFT       1.657       Click here for PD Search       Click here for Cross-React search
34       42 TYRGPCFTN       1.596       Click here for PD Search       Click here for Cross-React search
28       36 CNHLADTYR       1.58       Click here for PD Search       Click here for Cross-React search
48       56 HCKNKEHFV       1.553       Click here for PD Search       Click here for Cross-React search
49       57 CKNKEHFVS       1.53       Click here for PD Search       Click here for Cross-React search
40       48 FTNASCDDH       1.21       Click here for PD Search       Click here for Cross-React search
21       29 VKTEAKLCN       1.165       Click here for PD Search       Click here for Cross-React search
32       40 ADTYRGPCF       1.16       Click here for PD Search       Click here for Cross-React search
35       43 YRGPCFTNA       1.117       Click here for PD Search       Click here for Cross-React search
31       39 LADTYRGPC       1.105       Click here for PD Search       Click here for Cross-React search
43       51 ASCDDHCKN       1.038       Click here for PD Search       Click here for Cross-React search
42       50 NASCDDHCK       1.038       Click here for PD Search       Click here for Cross-React search
19       27 GVVKTEAKL       0.992       Click here for PD Search       Click here for Cross-React search
36       44 RGPCFTNAS       0.955       Click here for PD Search       Click here for Cross-React search
23       31 TEAKLCNHL       0.881       Click here for PD Search       Click here for Cross-React search
15       23 LAQEGVVKT       0.859       Click here for PD Search       Click here for Cross-React search
26       34 KLCNHLADT       0.849       Click here for PD Search       Click here for Cross-React search
41       49 TNASCDDHC       0.749       Click here for PD Search       Click here for Cross-React search
52       60 KEHFVSGTC       0.679       Click here for PD Search       Click here for Cross-React search
27       35 LCNHLADTY       0.665       Click here for PD Search       Click here for Cross-React search
24       32 EAKLCNHLA       0.616       Click here for PD Search       Click here for Cross-React search
25       33 AKLCNHLAD       0.594       Click here for PD Search       Click here for Cross-React search
20       28 VVKTEAKLC       0.538       Click here for PD Search       Click here for Cross-React search
14       22 FLAQEGVVK       0.516       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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