List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAAGLLVFVLAISEIASVKGKLCEKPSVTWSGKCKVKQTDKCDKRCIEWEGAKHGACHKR
DSKATCFCYFDCDPTKNPGPPPGAPKGKAPAPSPPSGGGAPPPSGGEGGDGPPPPEGGEG
GGDGGGEGGGEGGGDGGGEGGGEGGGDGGGDGGGEGGGEGGGER

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
37       45 KQTDKCDKR       7.248       Click here for PD Search       Click here for Cross-React search
73       81 DPTKNPGPP       5.43       Click here for PD Search       Click here for Cross-React search
74       82 PTKNPGPPP       5.028       Click here for PD Search       Click here for Cross-React search
33       41 KCKVKQTDK       3.289       Click here for PD Search       Click here for Cross-React search
75       83 TKNPGPPPG       3.218       Click here for PD Search       Click here for Cross-React search
80       88 PPPGAPKGK       2.801       Click here for PD Search       Click here for Cross-React search
36       44 VKQTDKCDK       2.747       Click here for PD Search       Click here for Cross-React search
35       43 KVKQTDKCD       2.747       Click here for PD Search       Click here for Cross-React search
88       96 KAPAPSPPS       2.595       Click here for PD Search       Click here for Cross-React search
86       94 KGKAPAPSP       2.478       Click here for PD Search       Click here for Cross-React search
85       93 PKGKAPAPS       2.478       Click here for PD Search       Click here for Cross-React search
58       66 HKRDSKATC       2.309       Click here for PD Search       Click here for Cross-React search
57       65 CHKRDSKAT       2.309       Click here for PD Search       Click here for Cross-React search
76       84 KNPGPPPGA       2.252       Click here for PD Search       Click here for Cross-React search
78       86 PGPPPGAPK       2.166       Click here for PD Search       Click here for Cross-React search
112       120 PPPPEGGEG       2.058       Click here for PD Search       Click here for Cross-React search
111       119 GPPPPEGGE       2.058       Click here for PD Search       Click here for Cross-React search
71       79 DCDPTKNPG       2.033       Click here for PD Search       Click here for Cross-React search
110       118 DGPPPPEGG       1.984       Click here for PD Search       Click here for Cross-React search
109       117 GDGPPPPEG       1.984       Click here for PD Search       Click here for Cross-React search
108       116 GGDGPPPPE       1.984       Click here for PD Search       Click here for Cross-React search
107       115 EGGDGPPPP       1.984       Click here for PD Search       Click here for Cross-React search
38       46 QTDKCDKRC       1.943       Click here for PD Search       Click here for Cross-React search
87       95 GKAPAPSPP       1.916       Click here for PD Search       Click here for Cross-React search
72       80 CDPTKNPGP       1.882       Click here for PD Search       Click here for Cross-React search
84       92 APKGKAPAP       1.868       Click here for PD Search       Click here for Cross-React search
82       90 PGAPKGKAP       1.83       Click here for PD Search       Click here for Cross-React search
81       89 PPGAPKGKA       1.83       Click here for PD Search       Click here for Cross-React search
69       77 YFDCDPTKN       1.803       Click here for PD Search       Click here for Cross-React search
70       78 FDCDPTKNP       1.779       Click here for PD Search       Click here for Cross-React search
77       85 NPGPPPGAP       1.742       Click here for PD Search       Click here for Cross-React search
32       40 GKCKVKQTD       1.628       Click here for PD Search       Click here for Cross-React search
56       64 ACHKRDSKA       1.616       Click here for PD Search       Click here for Cross-React search
53       61 KHGACHKRD       1.607       Click here for PD Search       Click here for Cross-React search
55       63 GACHKRDSK       1.583       Click here for PD Search       Click here for Cross-React search
19       27 KGKLCEKPS       1.555       Click here for PD Search       Click here for Cross-React search
25       33 KPSVTWSGK       1.533       Click here for PD Search       Click here for Cross-React search
59       67 KRDSKATCF       1.469       Click here for PD Search       Click here for Cross-React search
79       87 GPPPGAPKG       1.386       Click here for PD Search       Click here for Cross-React search
24       32 EKPSVTWSG       1.327       Click here for PD Search       Click here for Cross-React search
113       121 PPPEGGEGG       1.317       Click here for PD Search       Click here for Cross-React search
31       39 SGKCKVKQT       1.306       Click here for PD Search       Click here for Cross-React search
89       97 APAPSPPSG       1.284       Click here for PD Search       Click here for Cross-React search
106       114 GEGGDGPPP       1.27       Click here for PD Search       Click here for Cross-React search
90       98 PAPSPPSGG       1.258       Click here for PD Search       Click here for Cross-React search
83       91 GAPKGKAPA       1.196       Click here for PD Search       Click here for Cross-React search
102       110 PPSGGEGGD       1.101       Click here for PD Search       Click here for Cross-React search
54       62 HGACHKRDS       1.077       Click here for PD Search       Click here for Cross-React search
48       56 EWEGAKHGA       1.062       Click here for PD Search       Click here for Cross-React search
100       108 APPPSGGEG       1.04       Click here for PD Search       Click here for Cross-React search
99       107 GAPPPSGGE       1.04       Click here for PD Search       Click here for Cross-React search
101       109 PPPSGGEGG       1.019       Click here for PD Search       Click here for Cross-React search
52       60 AKHGACHKR       0.972       Click here for PD Search       Click here for Cross-React search
30       38 WSGKCKVKQ       0.952       Click here for PD Search       Click here for Cross-React search
43       51 DKRCIEWEG       0.95       Click here for PD Search       Click here for Cross-React search
40       48 DKCDKRCIE       0.944       Click here for PD Search       Click here for Cross-React search
95       103 PSGGGAPPP       0.929       Click here for PD Search       Click here for Cross-React search
94       102 PPSGGGAPP       0.929       Click here for PD Search       Click here for Cross-React search
115       123 PEGGEGGGD       0.91       Click here for PD Search       Click here for Cross-React search
34       42 CKVKQTDKC       0.882       Click here for PD Search       Click here for Cross-React search
18       26 VKGKLCEKP       0.861       Click here for PD Search       Click here for Cross-React search
114       122 PPEGGEGGG       0.843       Click here for PD Search       Click here for Cross-React search
21       29 KLCEKPSVT       0.842       Click here for PD Search       Click here for Cross-React search
105       113 GGEGGDGPP       0.813       Click here for PD Search       Click here for Cross-React search
96       104 SGGGAPPPS       0.805       Click here for PD Search       Click here for Cross-React search
93       101 SPPSGGGAP       0.805       Click here for PD Search       Click here for Cross-React search
92       100 PSPPSGGGA       0.805       Click here for PD Search       Click here for Cross-React search
91       99 APSPPSGGG       0.805       Click here for PD Search       Click here for Cross-React search
13       21 SEIASVKGK       0.801       Click here for PD Search       Click here for Cross-React search
29       37 TWSGKCKVK       0.793       Click here for PD Search       Click here for Cross-React search
39       47 TDKCDKRCI       0.786       Click here for PD Search       Click here for Cross-React search
17       25 SVKGKLCEK       0.746       Click here for PD Search       Click here for Cross-React search
47       55 IEWEGAKHG       0.737       Click here for PD Search       Click here for Cross-React search
23       31 CEKPSVTWS       0.719       Click here for PD Search       Click here for Cross-React search
104       112 SGGEGGDGP       0.704       Click here for PD Search       Click here for Cross-React search
103       111 PSGGEGGDG       0.704       Click here for PD Search       Click here for Cross-React search
156       164 GGGEGGGER       0.683       Click here for PD Search       Click here for Cross-React search
155       163 EGGGEGGGE       0.604       Click here for PD Search       Click here for Cross-React search
68       76 CYFDCDPTK       0.601       Click here for PD Search       Click here for Cross-React search
41       49 KCDKRCIEW       0.594       Click here for PD Search       Click here for Cross-React search
98       106 GGAPPPSGG       0.594       Click here for PD Search       Click here for Cross-React search
97       105 GGGAPPPSG       0.594       Click here for PD Search       Click here for Cross-React search
151       159 DGGGEGGGE       0.583       Click here for PD Search       Click here for Cross-React search
139       147 EGGGEGGGD       0.583       Click here for PD Search       Click here for Cross-React search
135       143 DGGGEGGGE       0.583       Click here for PD Search       Click here for Cross-React search
131       139 EGGGDGGGE       0.583       Click here for PD Search       Click here for Cross-React search
127       135 EGGGEGGGD       0.583       Click here for PD Search       Click here for Cross-React search
123       131 DGGGEGGGE       0.583       Click here for PD Search       Click here for Cross-React search
119       127 EGGGDGGGE       0.583       Click here for PD Search       Click here for Cross-React search
116       124 EGGEGGGDG       0.583       Click here for PD Search       Click here for Cross-React search
20       28 GKLCEKPSV       0.577       Click here for PD Search       Click here for Cross-React search
45       53 RCIEWEGAK       0.575       Click here for PD Search       Click here for Cross-React search
44       52 KRCIEWEGA       0.575       Click here for PD Search       Click here for Cross-React search
147       155 DGGGDGGGE       0.562       Click here for PD Search       Click here for Cross-React search
143       151 EGGGDGGGD       0.562       Click here for PD Search       Click here for Cross-React search
27       35 SVTWSGKCK       0.531       Click here for PD Search       Click here for Cross-React search
42       50 CDKRCIEWE       0.515       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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