List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MADAEHERIFKKFDTDGDGKISAAELEEALKKLGSVTPDDVTRMMAKIDTDGDGNISFQE
FTEFASANPGLMKDVAKVF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
12       20 KFDTDGDGK       2.595       Click here for PD Search       Click here for Cross-React search
11       19 KKFDTDGDG       2.595       Click here for PD Search       Click here for Cross-React search
10       18 FKKFDTDGD       2.271       Click here for PD Search       Click here for Cross-React search
4       12 AEHERIFKK       2.232       Click here for PD Search       Click here for Cross-React search
7       15 ERIFKKFDT       1.956       Click here for PD Search       Click here for Cross-React search
5       13 EHERIFKKF       1.913       Click here for PD Search       Click here for Cross-React search
8       16 RIFKKFDTD       1.886       Click here for PD Search       Click here for Cross-React search
3       11 DAEHERIFK       1.864       Click here for PD Search       Click here for Cross-React search
6       14 HERIFKKFD       1.845       Click here for PD Search       Click here for Cross-React search
47       55 KIDTDGDGN       1.689       Click here for PD Search       Click here for Cross-React search
24       32 AELEEALKK       1.641       Click here for PD Search       Click here for Cross-React search
35       43 SVTPDDVTR       1.478       Click here for PD Search       Click here for Cross-React search
37       45 TPDDVTRMM       1.456       Click here for PD Search       Click here for Cross-React search
14       22 DTDGDGKIS       1.408       Click here for PD Search       Click here for Cross-React search
31       39 KKLGSVTPD       1.377       Click here for PD Search       Click here for Cross-React search
25       33 ELEEALKKL       1.34       Click here for PD Search       Click here for Cross-React search
39       47 DDVTRMMAK       1.318       Click here for PD Search       Click here for Cross-React search
43       51 RMMAKIDTD       1.245       Click here for PD Search       Click here for Cross-React search
27       35 EEALKKLGS       1.244       Click here for PD Search       Click here for Cross-React search
32       40 KLGSVTPDD       1.15       Click here for PD Search       Click here for Cross-React search
49       57 DTDGDGNIS       1.132       Click here for PD Search       Click here for Cross-React search
36       44 VTPDDVTRM       1.092       Click here for PD Search       Click here for Cross-React search
42       50 TRMMAKIDT       1.076       Click here for PD Search       Click here for Cross-React search
1       9 MADAEHERI       1.076       Click here for PD Search       Click here for Cross-React search
46       54 AKIDTDGDG       1.061       Click here for PD Search       Click here for Cross-React search
45       53 MAKIDTDGD       1.061       Click here for PD Search       Click here for Cross-React search
66       74 SANPGLMKD       1.034       Click here for PD Search       Click here for Cross-React search
38       46 PDDVTRMMA       1.019       Click here for PD Search       Click here for Cross-React search
55       63 NISFQEFTE       0.967       Click here for PD Search       Click here for Cross-React search
9       17 IFKKFDTDG       0.953       Click here for PD Search       Click here for Cross-React search
2       10 ADAEHERIF       0.941       Click here for PD Search       Click here for Cross-React search
20       28 KISAAELEE       0.935       Click here for PD Search       Click here for Cross-React search
13       21 FDTDGDGKI       0.91       Click here for PD Search       Click here for Cross-React search
59       67 QEFTEFASA       0.875       Click here for PD Search       Click here for Cross-React search
15       23 TDGDGKISA       0.852       Click here for PD Search       Click here for Cross-React search
62       70 TEFASANPG       0.829       Click here for PD Search       Click here for Cross-React search
23       31 AAELEEALK       0.829       Click here for PD Search       Click here for Cross-React search
60       68 EFTEFASAN       0.813       Click here for PD Search       Click here for Cross-React search
26       34 LEEALKKLG       0.766       Click here for PD Search       Click here for Cross-React search
58       66 FQEFTEFAS       0.75       Click here for PD Search       Click here for Cross-React search
57       65 SFQEFTEFA       0.75       Click here for PD Search       Click here for Cross-React search
34       42 GSVTPDDVT       0.747       Click here for PD Search       Click here for Cross-React search
52       60 GDGNISFQE       0.73       Click here for PD Search       Click here for Cross-React search
61       69 FTEFASANP       0.726       Click here for PD Search       Click here for Cross-React search
69       77 PGLMKDVAK       0.712       Click here for PD Search       Click here for Cross-React search
51       59 DGDGNISFQ       0.704       Click here for PD Search       Click here for Cross-React search
30       38 LKKLGSVTP       0.68       Click here for PD Search       Click here for Cross-React search
53       61 DGNISFQEF       0.639       Click here for PD Search       Click here for Cross-React search
44       52 MMAKIDTDG       0.629       Click here for PD Search       Click here for Cross-React search
65       73 ASANPGLMK       0.625       Click here for PD Search       Click here for Cross-React search
17       25 GDGKISAAE       0.618       Click here for PD Search       Click here for Cross-React search
16       24 DGDGKISAA       0.596       Click here for PD Search       Click here for Cross-React search
48       56 IDTDGDGNI       0.592       Click here for PD Search       Click here for Cross-React search
50       58 TDGDGNISF       0.587       Click here for PD Search       Click here for Cross-React search
68       76 NPGLMKDVA       0.573       Click here for PD Search       Click here for Cross-React search
67       75 ANPGLMKDV       0.573       Click here for PD Search       Click here for Cross-React search
22       30 SAAELEEAL       0.556       Click here for PD Search       Click here for Cross-React search
41       49 VTRMMAKID       0.553       Click here for PD Search       Click here for Cross-React search
40       48 DVTRMMAKI       0.553       Click here for PD Search       Click here for Cross-React search
54       62 GNISFQEFT       0.552       Click here for PD Search       Click here for Cross-React search
19       27 GKISAAELE       0.534       Click here for PD Search       Click here for Cross-React search
28       36 EALKKLGSV       0.533       Click here for PD Search       Click here for Cross-React search
56       64 ISFQEFTEF       0.52       Click here for PD Search       Click here for Cross-React search
18       26 DGKISAAEL       0.515       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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