List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG
FISFQEFTDFARANRGLLKDVAKIF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
6       14 PQDKAERER       8.196       Click here for PD Search       Click here for Cross-React search
5       13 HPQDKAERE       5.694       Click here for PD Search       Click here for Cross-React search
4       12 DHPQDKAER       5.491       Click here for PD Search       Click here for Cross-React search
3       11 DDHPQDKAE       4.681       Click here for PD Search       Click here for Cross-React search
7       15 QDKAERERI       3.715       Click here for PD Search       Click here for Cross-React search
2       10 ADDHPQDKA       2.731       Click here for PD Search       Click here for Cross-React search
1       9 MADDHPQDK       2.675       Click here for PD Search       Click here for Cross-React search
9       17 KAERERIFK       2.225       Click here for PD Search       Click here for Cross-React search
10       18 AERERIFKR       2.179       Click here for PD Search       Click here for Cross-React search
11       19 ERERIFKRF       1.868       Click here for PD Search       Click here for Cross-React search
8       16 DKAERERIF       1.858       Click here for PD Search       Click here for Cross-React search
12       20 RERIFKRFD       1.801       Click here for PD Search       Click here for Cross-React search
18       26 RFDANGDGK       1.187       Click here for PD Search       Click here for Cross-React search
17       25 KRFDANGDG       1.187       Click here for PD Search       Click here for Cross-React search
72       80 RANRGLLKD       1.104       Click here for PD Search       Click here for Cross-React search
16       24 FKRFDANGD       1.038       Click here for PD Search       Click here for Cross-React search
68       76 TDFARANRG       1.025       Click here for PD Search       Click here for Cross-React search
43       51 TPDEVKHMM       1.007       Click here for PD Search       Click here for Cross-React search
41       49 SITPDEVKH       0.965       Click here for PD Search       Click here for Cross-React search
13       21 ERIFKRFDA       0.929       Click here for PD Search       Click here for Cross-React search
67       75 FTDFARANR       0.897       Click here for PD Search       Click here for Cross-React search
14       22 RIFKRFDAN       0.863       Click here for PD Search       Click here for Cross-React search
65       73 QEFTDFARA       0.854       Click here for PD Search       Click here for Cross-React search
66       74 EFTDFARAN       0.793       Click here for PD Search       Click here for Cross-React search
45       53 DEVKHMMAE       0.789       Click here for PD Search       Click here for Cross-React search
64       72 FQEFTDFAR       0.732       Click here for PD Search       Click here for Cross-React search
42       50 ITPDEVKHM       0.713       Click here for PD Search       Click here for Cross-React search
44       52 PDEVKHMMA       0.705       Click here for PD Search       Click here for Cross-React search
40       48 GSITPDEVK       0.702       Click here for PD Search       Click here for Cross-React search
71       79 ARANRGLLK       0.668       Click here for PD Search       Click here for Cross-React search
20       28 DANGDGKIS       0.657       Click here for PD Search       Click here for Cross-React search
37       45 KTLGSITPD       0.65       Click here for PD Search       Click here for Cross-React search
52       60 AEIDTDGDG       0.636       Click here for PD Search       Click here for Cross-React search
51       59 MAEIDTDGD       0.636       Click here for PD Search       Click here for Cross-React search
48       56 KHMMAEIDT       0.621       Click here for PD Search       Click here for Cross-React search
69       77 DFARANRGL       0.586       Click here for PD Search       Click here for Cross-React search
38       46 TLGSITPDE       0.563       Click here for PD Search       Click here for Cross-React search
53       61 EIDTDGDGF       0.546       Click here for PD Search       Click here for Cross-React search
75       83 RGLLKDVAK       0.52       Click here for PD Search       Click here for Cross-React search
49       57 HMMAEIDTD       0.519       Click here for PD Search       Click here for Cross-React search
63       71 SFQEFTDFA       0.501       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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