List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MADRPQQLQVHPQRGHGHYEGGIKNQRGGGPSAVKVMAVLAALPVGGTLLALAGLTLAGS
VIGLLVTSPLFIIFSPVLVPAAIVVGLAVASFLSSGALGLTGLSSLSWVLNYLRCASQSL
PREMDQAKRRMQDMAAFVGQKTREVGQEIQSRAQEGRRT

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
122       130 REMDQAKRR       8.68       Click here for PD Search       Click here for Cross-React search
125       133 DQAKRRMQD       7.401       Click here for PD Search       Click here for Cross-React search
121       129 PREMDQAKR       6.853       Click here for PD Search       Click here for Cross-React search
150       158 QSRAQEGRR       6.032       Click here for PD Search       Click here for Cross-React search
151       159 SRAQEGRRT       5.027       Click here for PD Search       Click here for Cross-React search
126       134 QAKRRMQDM       4.386       Click here for PD Search       Click here for Cross-React search
124       132 MDQAKRRMQ       4.386       Click here for PD Search       Click here for Cross-React search
123       131 EMDQAKRRM       4.386       Click here for PD Search       Click here for Cross-React search
140       148 QKTREVGQE       4.309       Click here for PD Search       Click here for Cross-React search
147       155 QEIQSRAQE       3.341       Click here for PD Search       Click here for Cross-React search
118       126 QSLPREMDQ       3.315       Click here for PD Search       Click here for Cross-React search
12       20 PQRGHGHYE       2.977       Click here for PD Search       Click here for Cross-React search
120       128 LPREMDQAK       2.885       Click here for PD Search       Click here for Cross-React search
6       14 QQLQVHPQR       2.618       Click here for PD Search       Click here for Cross-React search
117       125 SQSLPREMD       2.565       Click here for PD Search       Click here for Cross-React search
128       136 KRRMQDMAA       2.558       Click here for PD Search       Click here for Cross-React search
127       135 AKRRMQDMA       2.558       Click here for PD Search       Click here for Cross-React search
24       32 KNQRGGGPS       2.527       Click here for PD Search       Click here for Cross-React search
3       11 DRPQQLQVH       2.524       Click here for PD Search       Click here for Cross-React search
1       9 MADRPQQLQ       2.499       Click here for PD Search       Click here for Cross-React search
139       147 GQKTREVGQ       2.462       Click here for PD Search       Click here for Cross-React search
19       27 YEGGIKNQR       2.344       Click here for PD Search       Click here for Cross-React search
11       19 HPQRGHGHY       2.339       Click here for PD Search       Click here for Cross-React search
4       12 RPQQLQVHP       2.337       Click here for PD Search       Click here for Cross-React search
149       157 IQSRAQEGR       2.159       Click here for PD Search       Click here for Cross-React search
5       13 PQQLQVHPQ       2.067       Click here for PD Search       Click here for Cross-React search
119       127 SLPREMDQA       1.934       Click here for PD Search       Click here for Cross-React search
148       156 EIQSRAQEG       1.909       Click here for PD Search       Click here for Cross-React search
146       154 GQEIQSRAQ       1.909       Click here for PD Search       Click here for Cross-React search
13       21 QRGHGHYEG       1.906       Click here for PD Search       Click here for Cross-React search
2       10 ADRPQQLQV       1.874       Click here for PD Search       Click here for Cross-React search
141       149 KTREVGQEI       1.744       Click here for PD Search       Click here for Cross-React search
18       26 HYEGGIKNQ       1.629       Click here for PD Search       Click here for Cross-React search
116       124 ASQSLPREM       1.552       Click here for PD Search       Click here for Cross-React search
142       150 TREVGQEIQ       1.51       Click here for PD Search       Click here for Cross-React search
7       15 QLQVHPQRG       1.496       Click here for PD Search       Click here for Cross-React search
20       28 EGGIKNQRG       1.481       Click here for PD Search       Click here for Cross-React search
9       17 QVHPQRGHG       1.41       Click here for PD Search       Click here for Cross-React search
144       152 EVGQEIQSR       1.402       Click here for PD Search       Click here for Cross-React search
143       151 REVGQEIQS       1.402       Click here for PD Search       Click here for Cross-React search
23       31 IKNQRGGGP       1.322       Click here for PD Search       Click here for Cross-React search
25       33 NQRGGGPSA       1.277       Click here for PD Search       Click here for Cross-React search
136       144 AFVGQKTRE       1.257       Click here for PD Search       Click here for Cross-React search
8       16 LQVHPQRGH       1.175       Click here for PD Search       Click here for Cross-React search
129       137 RRMQDMAAF       1.108       Click here for PD Search       Click here for Cross-React search
10       18 VHPQRGHGH       1.108       Click here for PD Search       Click here for Cross-React search
14       22 RGHGHYEGG       1.089       Click here for PD Search       Click here for Cross-React search
138       146 VGQKTREVG       1.055       Click here for PD Search       Click here for Cross-React search
114       122 RCASQSLPR       0.951       Click here for PD Search       Click here for Cross-React search
17       25 GHYEGGIKN       0.931       Click here for PD Search       Click here for Cross-React search
137       145 FVGQKTREV       0.923       Click here for PD Search       Click here for Cross-React search
22       30 GIKNQRGGG       0.846       Click here for PD Search       Click here for Cross-React search
21       29 GGIKNQRGG       0.846       Click here for PD Search       Click here for Cross-React search
115       123 CASQSLPRE       0.84       Click here for PD Search       Click here for Cross-React search
145       153 VGQEIQSRA       0.818       Click here for PD Search       Click here for Cross-React search
111       119 NYLRCASQS       0.791       Click here for PD Search       Click here for Cross-React search
16       24 HGHYEGGIK       0.788       Click here for PD Search       Click here for Cross-React search
135       143 AAFVGQKTR       0.733       Click here for PD Search       Click here for Cross-React search
27       35 RGGGPSAVK       0.68       Click here for PD Search       Click here for Cross-React search
26       34 QRGGGPSAV       0.589       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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