List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAFASVLKDAEITAALDGCKADGSFDHKKFFKACGLAGKSGDDVKKAFAIIDQDKSGFIE
EEELKLFLQNFKAGARTLSDAETKAFLKAGDTDGDGKIGVDEFAAMIKG


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
76       84 RTLSDAETK       3.805       Click here for PD Search       Click here for Cross-React search
39       47 KSGDDVKKA       3.204       Click here for PD Search       Click here for Cross-React search
38       46 GKSGDDVKK       3.138       Click here for PD Search       Click here for Cross-React search
21       29 ADGSFDHKK       2.543       Click here for PD Search       Click here for Cross-React search
20       28 KADGSFDHK       2.543       Click here for PD Search       Click here for Cross-React search
24       32 SFDHKKFFK       2.284       Click here for PD Search       Click here for Cross-React search
22       30 DGSFDHKKF       2.18       Click here for PD Search       Click here for Cross-React search
55       63 KSGFIEEEE       2.092       Click here for PD Search       Click here for Cross-React search
54       62 DKSGFIEEE       2.017       Click here for PD Search       Click here for Cross-React search
53       61 QDKSGFIEE       2.017       Click here for PD Search       Click here for Cross-React search
69       77 QNFKAGART       1.989       Click here for PD Search       Click here for Cross-React search
77       85 TLSDAETKA       1.963       Click here for PD Search       Click here for Cross-React search
52       60 DQDKSGFIE       1.945       Click here for PD Search       Click here for Cross-React search
75       83 ARTLSDAET       1.922       Click here for PD Search       Click here for Cross-React search
89       97 AGDTDGDGK       1.901       Click here for PD Search       Click here for Cross-React search
88       96 KAGDTDGDG       1.901       Click here for PD Search       Click here for Cross-React search
80       88 DAETKAFLK       1.757       Click here for PD Search       Click here for Cross-React search
25       33 FDHKKFFKA       1.722       Click here for PD Search       Click here for Cross-React search
37       45 AGKSGDDVK       1.585       Click here for PD Search       Click here for Cross-React search
87       95 LKAGDTDGD       1.584       Click here for PD Search       Click here for Cross-React search
72       80 KAGARTLSD       1.522       Click here for PD Search       Click here for Cross-React search
40       48 SGDDVKKAF       1.387       Click here for PD Search       Click here for Cross-React search
91       99 DTDGDGKIG       1.319       Click here for PD Search       Click here for Cross-React search
90       98 GDTDGDGKI       1.319       Click here for PD Search       Click here for Cross-React search
74       82 GARTLSDAE       1.318       Click here for PD Search       Click here for Cross-React search
57       65 GFIEEEELK       1.287       Click here for PD Search       Click here for Cross-React search
61       69 EEELKLFLQ       1.262       Click here for PD Search       Click here for Cross-React search
60       68 EEEELKLFL       1.262       Click here for PD Search       Click here for Cross-React search
79       87 SDAETKAFL       1.178       Click here for PD Search       Click here for Cross-React search
78       86 LSDAETKAF       1.178       Click here for PD Search       Click here for Cross-React search
62       70 EELKLFLQN       1.172       Click here for PD Search       Click here for Cross-React search
68       76 LQNFKAGAR       1.136       Click here for PD Search       Click here for Cross-React search
23       31 GSFDHKKFF       1.13       Click here for PD Search       Click here for Cross-React search
59       67 IEEEELKLF       1.073       Click here for PD Search       Click here for Cross-React search
58       66 FIEEEELKL       1.073       Click here for PD Search       Click here for Cross-React search
26       34 DHKKFFKAC       1.066       Click here for PD Search       Click here for Cross-React search
81       89 AETKAFLKA       1.063       Click here for PD Search       Click here for Cross-React search
41       49 GDDVKKAFA       1.046       Click here for PD Search       Click here for Cross-React search
82       90 ETKAFLKAG       1.041       Click here for PD Search       Click here for Cross-React search
84       92 KAFLKAGDT       1.004       Click here for PD Search       Click here for Cross-React search
83       91 TKAFLKAGD       1.004       Click here for PD Search       Click here for Cross-React search
70       78 NFKAGARTL       0.947       Click here for PD Search       Click here for Cross-React search
49       57 AIIDQDKSG       0.918       Click here for PD Search       Click here for Cross-React search
35       43 GLAGKSGDD       0.872       Click here for PD Search       Click here for Cross-React search
56       64 SGFIEEEEL       0.863       Click here for PD Search       Click here for Cross-React search
85       93 AFLKAGDTD       0.838       Click here for PD Search       Click here for Cross-React search
65       73 KLFLQNFKA       0.829       Click here for PD Search       Click here for Cross-React search
86       94 FLKAGDTDG       0.821       Click here for PD Search       Click here for Cross-React search
48       56 FAIIDQDKS       0.804       Click here for PD Search       Click here for Cross-React search
71       79 FKAGARTLS       0.789       Click here for PD Search       Click here for Cross-React search
51       59 IDQDKSGFI       0.787       Click here for PD Search       Click here for Cross-React search
50       58 IIDQDKSGF       0.787       Click here for PD Search       Click here for Cross-React search
73       81 AGARTLSDA       0.769       Click here for PD Search       Click here for Cross-React search
42       50 DDVKKAFAI       0.741       Click here for PD Search       Click here for Cross-React search
45       53 KKAFAIIDQ       0.725       Click here for PD Search       Click here for Cross-React search
8       16 KDAEITAAL       0.719       Click here for PD Search       Click here for Cross-React search
7       15 LKDAEITAA       0.719       Click here for PD Search       Click here for Cross-React search
94       102 GDGKIGVDE       0.703       Click here for PD Search       Click here for Cross-React search
5       13 SVLKDAEIT       0.7       Click here for PD Search       Click here for Cross-React search
19       27 CKADGSFDH       0.682       Click here for PD Search       Click here for Cross-React search
93       101 DGDGKIGVD       0.678       Click here for PD Search       Click here for Cross-React search
64       72 LKLFLQNFK       0.677       Click here for PD Search       Click here for Cross-React search
36       44 LAGKSGDDV       0.654       Click here for PD Search       Click here for Cross-React search
27       35 HKKFFKACG       0.632       Click here for PD Search       Click here for Cross-React search
95       103 DGKIGVDEF       0.616       Click here for PD Search       Click here for Cross-React search
3       11 FASVLKDAE       0.606       Click here for PD Search       Click here for Cross-React search
47       55 AFAIIDQDK       0.606       Click here for PD Search       Click here for Cross-React search
46       54 KAFAIIDQD       0.606       Click here for PD Search       Click here for Cross-React search
9       17 DAEITAALD       0.6       Click here for PD Search       Click here for Cross-React search
92       100 TDGDGKIGV       0.586       Click here for PD Search       Click here for Cross-React search
63       71 ELKLFLQNF       0.586       Click here for PD Search       Click here for Cross-React search
6       14 VLKDAEITA       0.528       Click here for PD Search       Click here for Cross-React search
101       109 DEFAAMIKG       0.507       Click here for PD Search       Click here for Cross-React search
67       75 FLQNFKAGA       0.502       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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