List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAFSFTILMETRQLMAFYLGDCLRALNLNPTLAQIEKLGGTKKKNEKKLKVEEFLPIFSQ
VKKEKDHGTLEDFIECMKLYDKSENGTMMLAELNHILLALGEKLEDSQVDSIFKECMDPE
DDEGNIPYTPFLKRLLAGPYPDAQ


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
42       50 KKKNEKKLK       10.792       Click here for PD Search       Click here for Cross-React search
40       48 GTKKKNEKK       9.345       Click here for PD Search       Click here for Cross-React search
41       49 TKKKNEKKL       7.788       Click here for PD Search       Click here for Cross-React search
39       47 GGTKKKNEK       4.625       Click here for PD Search       Click here for Cross-React search
43       51 KKNEKKLKV       4.005       Click here for PD Search       Click here for Cross-React search
59       67 SQVKKEKDH       3.982       Click here for PD Search       Click here for Cross-React search
44       52 KNEKKLKVE       3.468       Click here for PD Search       Click here for Cross-React search
45       53 NEKKLKVEE       3.004       Click here for PD Search       Click here for Cross-React search
60       68 QVKKEKDHG       2.941       Click here for PD Search       Click here for Cross-React search
62       70 KKEKDHGTL       2.723       Click here for PD Search       Click here for Cross-React search
58       66 FSQVKKEKD       2.534       Click here for PD Search       Click here for Cross-React search
117       125 MDPEDDEGN       2.498       Click here for PD Search       Click here for Cross-React search
61       69 VKKEKDHGT       2.451       Click here for PD Search       Click here for Cross-React search
36       44 EKLGGTKKK       2.372       Click here for PD Search       Click here for Cross-React search
63       71 KEKDHGTLE       2.358       Click here for PD Search       Click here for Cross-React search
78       86 KLYDKSENG       2.341       Click here for PD Search       Click here for Cross-React search
77       85 MKLYDKSEN       2.341       Click here for PD Search       Click here for Cross-React search
37       45 KLGGTKKKN       2.202       Click here for PD Search       Click here for Cross-React search
80       88 YDKSENGTM       2.028       Click here for PD Search       Click here for Cross-React search
64       72 EKDHGTLED       1.969       Click here for PD Search       Click here for Cross-React search
38       46 LGGTKKKNE       1.907       Click here for PD Search       Click here for Cross-React search
118       126 DPEDDEGNI       1.77       Click here for PD Search       Click here for Cross-React search
102       110 EKLEDSQVD       1.745       Click here for PD Search       Click here for Cross-React search
79       87 LYDKSENGT       1.69       Click here for PD Search       Click here for Cross-React search
114       122 KECMDPEDD       1.683       Click here for PD Search       Click here for Cross-React search
120       128 EDDEGNIPY       1.661       Click here for PD Search       Click here for Cross-React search
119       127 PEDDEGNIP       1.639       Click here for PD Search       Click here for Cross-React search
46       54 EKKLKVEEF       1.617       Click here for PD Search       Click here for Cross-React search
115       123 ECMDPEDDE       1.457       Click here for PD Search       Click here for Cross-React search
121       129 DDEGNIPYT       1.384       Click here for PD Search       Click here for Cross-React search
103       111 KLEDSQVDS       1.351       Click here for PD Search       Click here for Cross-React search
81       89 DKSENGTMM       1.281       Click here for PD Search       Click here for Cross-React search
122       130 DEGNIPYTP       1.281       Click here for PD Search       Click here for Cross-React search
100       108 LGEKLEDSQ       1.149       Click here for PD Search       Click here for Cross-React search
57       65 IFSQVKKEK       1.064       Click here for PD Search       Click here for Cross-React search
101       109 GEKLEDSQV       1.034       Click here for PD Search       Click here for Cross-React search
65       73 KDHGTLEDF       0.985       Click here for PD Search       Click here for Cross-React search
29       37 NPTLAQIEK       0.923       Click here for PD Search       Click here for Cross-React search
127       135 PYTPFLKRL       0.916       Click here for PD Search       Click here for Cross-React search
113       121 FKECMDPED       0.873       Click here for PD Search       Click here for Cross-React search
116       124 CMDPEDDEG       0.833       Click here for PD Search       Click here for Cross-React search
35       43 IEKLGGTKK       0.831       Click here for PD Search       Click here for Cross-React search
56       64 PIFSQVKKE       0.822       Click here for PD Search       Click here for Cross-React search
76       84 CMKLYDKSE       0.78       Click here for PD Search       Click here for Cross-React search
75       83 ECMKLYDKS       0.78       Click here for PD Search       Click here for Cross-React search
126       134 IPYTPFLKR       0.779       Click here for PD Search       Click here for Cross-React search
47       55 KKLKVEEFL       0.77       Click here for PD Search       Click here for Cross-React search
133       141 KRLLAGPYP       0.733       Click here for PD Search       Click here for Cross-React search
34       42 QIEKLGGTK       0.72       Click here for PD Search       Click here for Cross-React search
10       18 ETRQLMAFY       0.697       Click here for PD Search       Click here for Cross-React search
99       107 ALGEKLEDS       0.67       Click here for PD Search       Click here for Cross-React search
123       131 EGNIPYTPF       0.664       Click here for PD Search       Click here for Cross-React search
136       144 LAGPYPDAQ       0.663       Click here for PD Search       Click here for Cross-React search
125       133 NIPYTPFLK       0.639       Click here for PD Search       Click here for Cross-React search
82       90 KSENGTMML       0.632       Click here for PD Search       Click here for Cross-React search
134       142 RLLAGPYPD       0.612       Click here for PD Search       Click here for Cross-React search
48       56 KLKVEEFLP       0.595       Click here for PD Search       Click here for Cross-React search
107       115 SQVDSIFKE       0.595       Click here for PD Search       Click here for Cross-React search
106       114 DSQVDSIFK       0.574       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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