List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAFSRVAKLACLLLACMVATAPHAEAAITCGTVVTRLTPCLTFLRSGGAVAPACCNGVKA
LNNDAKTTPDRQAACGCLKTASTSISGIQLGNAASLAGKCGVNLPYKISPTIDCSKVK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
64       72 DAKTTPDRQ       11.977       Click here for PD Search       Click here for Cross-React search
63       71 NDAKTTPDR       11.122       Click here for PD Search       Click here for Cross-React search
62       70 NNDAKTTPD       9.132       Click here for PD Search       Click here for Cross-React search
66       74 KTTPDRQAA       7.246       Click here for PD Search       Click here for Cross-React search
65       73 AKTTPDRQA       7.246       Click here for PD Search       Click here for Cross-React search
61       69 LNNDAKTTP       4.509       Click here for PD Search       Click here for Cross-React search
59       67 KALNNDAKT       4.083       Click here for PD Search       Click here for Cross-React search
60       68 ALNNDAKTT       2.946       Click here for PD Search       Click here for Cross-React search
103       111 NLPYKISPT       2.621       Click here for PD Search       Click here for Cross-React search
105       113 PYKISPTID       2.314       Click here for PD Search       Click here for Cross-React search
58       66 VKALNNDAK       2.1       Click here for PD Search       Click here for Cross-React search
67       75 TTPDRQAAC       1.942       Click here for PD Search       Click here for Cross-React search
56       64 NGVKALNND       1.654       Click here for PD Search       Click here for Cross-React search
79       87 KTASTSISG       1.367       Click here for PD Search       Click here for Cross-React search
102       110 VNLPYKISP       1.348       Click here for PD Search       Click here for Cross-React search
68       76 TPDRQAACG       1.332       Click here for PD Search       Click here for Cross-React search
104       112 LPYKISPTI       1.143       Click here for PD Search       Click here for Cross-React search
78       86 LKTASTSIS       1.139       Click here for PD Search       Click here for Cross-React search
110       118 PTIDCSKVK       1.084       Click here for PD Search       Click here for Cross-React search
19       27 ATAPHAEAA       1.077       Click here for PD Search       Click here for Cross-React search
57       65 GVKALNNDA       1.039       Click here for PD Search       Click here for Cross-React search
99       107 KCGVNLPYK       0.985       Click here for PD Search       Click here for Cross-React search
101       109 GVNLPYKIS       0.863       Click here for PD Search       Click here for Cross-React search
106       114 YKISPTIDC       0.802       Click here for PD Search       Click here for Cross-React search
31       39 GTVVTRLTP       0.796       Click here for PD Search       Click here for Cross-React search
18       26 VATAPHAEA       0.791       Click here for PD Search       Click here for Cross-React search
17       25 MVATAPHAE       0.775       Click here for PD Search       Click here for Cross-React search
21       29 APHAEAAIT       0.747       Click here for PD Search       Click here for Cross-React search
20       28 TAPHAEAAI       0.747       Click here for PD Search       Click here for Cross-React search
109       117 SPTIDCSKV       0.726       Click here for PD Search       Click here for Cross-React search
91       99 GNAASLAGK       0.698       Click here for PD Search       Click here for Cross-React search
108       116 ISPTIDCSK       0.686       Click here for PD Search       Click here for Cross-React search
107       115 KISPTIDCS       0.686       Click here for PD Search       Click here for Cross-React search
76       84 GCLKTASTS       0.643       Click here for PD Search       Click here for Cross-React search
45       53 RSGGAVAPA       0.592       Click here for PD Search       Click here for Cross-React search
81       89 ASTSISGIQ       0.575       Click here for PD Search       Click here for Cross-React search
35       43 TRLTPCLTF       0.559       Click here for PD Search       Click here for Cross-React search
2       10 AFSRVAKLA       0.558       Click here for PD Search       Click here for Cross-React search
1       9 MAFSRVAKL       0.547       Click here for PD Search       Click here for Cross-React search
55       63 CNGVKALNN       0.531       Click here for PD Search       Click here for Cross-React search
38       46 TPCLTFLRS       0.519       Click here for PD Search       Click here for Cross-React search
89       97 QLGNAASLA       0.504       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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