List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAKSSTSYLVFLLLVLVVAISEIASVNGKVCEKPSKTWFGNCKDTEKCDKRCMEWEGAKH
GACHQRESKYMCFCYFDCDPKKNPGPPPGAPGTPGTPPAPPGGGEGDAPPGGGAPPPAGG
EGGGGGGEGGGGAPPPAGGEGGGGGGDGGGGAPPAA

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
79       87 DPKKNPGPP       7.939       Click here for PD Search       Click here for Cross-React search
43       51 KDTEKCDKR       7.648       Click here for PD Search       Click here for Cross-React search
80       88 PKKNPGPPP       7.351       Click here for PD Search       Click here for Cross-React search
81       89 KKNPGPPPG       4.705       Click here for PD Search       Click here for Cross-React search
77       85 DCDPKKNPG       2.972       Click here for PD Search       Click here for Cross-React search
78       86 CDPKKNPGP       2.752       Click here for PD Search       Click here for Cross-React search
75       83 YFDCDPKKN       2.636       Click here for PD Search       Click here for Cross-React search
76       84 FDCDPKKNP       2.601       Click here for PD Search       Click here for Cross-React search
32       40 EKPSKTWFG       2.439       Click here for PD Search       Click here for Cross-React search
93       101 TPGTPPAPP       2.405       Click here for PD Search       Click here for Cross-React search
82       90 KNPGPPPGA       2.377       Click here for PD Search       Click here for Cross-React search
62       70 ACHQRESKY       2.375       Click here for PD Search       Click here for Cross-React search
64       72 HQRESKYMC       2.327       Click here for PD Search       Click here for Cross-React search
63       71 CHQRESKYM       2.327       Click here for PD Search       Click here for Cross-React search
33       41 KPSKTWFGN       2.264       Click here for PD Search       Click here for Cross-React search
29       37 KVCEKPSKT       2.153       Click here for PD Search       Click here for Cross-React search
42       50 CKDTEKCDK       2.093       Click here for PD Search       Click here for Cross-React search
44       52 DTEKCDKRC       2.05       Click here for PD Search       Click here for Cross-React search
83       91 NPGPPPGAP       1.838       Click here for PD Search       Click here for Cross-React search
41       49 NCKDTEKCD       1.683       Click here for PD Search       Click here for Cross-React search
94       102 PGTPPAPPG       1.649       Click here for PD Search       Click here for Cross-React search
86       94 PPPGAPGTP       1.649       Click here for PD Search       Click here for Cross-React search
39       47 FGNCKDTEK       1.611       Click here for PD Search       Click here for Cross-React search
92       100 GTPGTPPAP       1.539       Click here for PD Search       Click here for Cross-React search
91       99 PGTPGTPPA       1.539       Click here for PD Search       Click here for Cross-React search
90       98 APGTPGTPP       1.539       Click here for PD Search       Click here for Cross-React search
59       67 KHGACHQRE       1.523       Click here for PD Search       Click here for Cross-React search
61       69 GACHQRESK       1.5       Click here for PD Search       Click here for Cross-React search
65       73 QRESKYMCF       1.481       Click here for PD Search       Click here for Cross-React search
28       36 GKVCEKPSK       1.477       Click here for PD Search       Click here for Cross-React search
46       54 EKCDKRCME       1.458       Click here for PD Search       Click here for Cross-React search
49       57 DKRCMEWEG       1.415       Click here for PD Search       Click here for Cross-React search
31       39 CEKPSKTWF       1.321       Click here for PD Search       Click here for Cross-React search
97       105 PPAPPGGGE       1.267       Click here for PD Search       Click here for Cross-React search
45       53 TEKCDKRCM       1.215       Click here for PD Search       Click here for Cross-React search
27       35 NGKVCEKPS       1.187       Click here for PD Search       Click here for Cross-React search
1       9 MAKSSTSYL       1.172       Click here for PD Search       Click here for Cross-React search
30       38 VCEKPSKTW       1.132       Click here for PD Search       Click here for Cross-React search
84       92 PGPPPGAPG       1.131       Click here for PD Search       Click here for Cross-React search
109       117 PPGGGAPPP       1.131       Click here for PD Search       Click here for Cross-React search
54       62 EWEGAKHGA       1.121       Click here for PD Search       Click here for Cross-React search
53       61 MEWEGAKHG       1.098       Click here for PD Search       Click here for Cross-React search
96       104 TPPAPPGGG       1.055       Click here for PD Search       Click here for Cross-React search
95       103 GTPPAPPGG       1.055       Click here for PD Search       Click here for Cross-React search
87       95 PPGAPGTPG       1.055       Click here for PD Search       Click here for Cross-React search
85       93 GPPPGAPGT       1.055       Click here for PD Search       Click here for Cross-React search
60       68 HGACHQRES       1.021       Click here for PD Search       Click here for Cross-React search
40       48 GNCKDTEKC       0.997       Click here for PD Search       Click here for Cross-React search
89       97 GAPGTPGTP       0.985       Click here for PD Search       Click here for Cross-React search
88       96 PGAPGTPGT       0.985       Click here for PD Search       Click here for Cross-React search
36       44 KTWFGNCKD       0.978       Click here for PD Search       Click here for Cross-React search
58       66 AKHGACHQR       0.888       Click here for PD Search       Click here for Cross-React search
47       55 KCDKRCMEW       0.885       Click here for PD Search       Click here for Cross-React search
74       82 CYFDCDPKK       0.879       Click here for PD Search       Click here for Cross-React search
2       10 AKSSTSYLV       0.879       Click here for PD Search       Click here for Cross-React search
105       113 EGDAPPGGG       0.875       Click here for PD Search       Click here for Cross-React search
104       112 GEGDAPPGG       0.875       Click here for PD Search       Click here for Cross-React search
103       111 GGEGDAPPG       0.875       Click here for PD Search       Click here for Cross-React search
102       110 GGGEGDAPP       0.875       Click here for PD Search       Click here for Cross-React search
101       109 PGGGEGDAP       0.875       Click here for PD Search       Click here for Cross-React search
100       108 PPGGGEGDA       0.875       Click here for PD Search       Click here for Cross-React search
99       107 APPGGGEGD       0.875       Click here for PD Search       Click here for Cross-React search
51       59 RCMEWEGAK       0.856       Click here for PD Search       Click here for Cross-React search
50       58 KRCMEWEGA       0.856       Click here for PD Search       Click here for Cross-React search
38       46 WFGNCKDTE       0.847       Click here for PD Search       Click here for Cross-React search
133       141 APPPAGGEG       0.827       Click here for PD Search       Click here for Cross-React search
132       140 GAPPPAGGE       0.827       Click here for PD Search       Click here for Cross-React search
114       122 APPPAGGEG       0.827       Click here for PD Search       Click here for Cross-React search
113       121 GAPPPAGGE       0.827       Click here for PD Search       Click here for Cross-React search
134       142 PPPAGGEGG       0.811       Click here for PD Search       Click here for Cross-React search
128       136 EGGGGAPPP       0.811       Click here for PD Search       Click here for Cross-React search
115       123 PPPAGGEGG       0.811       Click here for PD Search       Click here for Cross-React search
98       106 PAPPGGGEG       0.811       Click here for PD Search       Click here for Cross-React search
107       115 DAPPGGGAP       0.798       Click here for PD Search       Click here for Cross-React search
35       43 SKTWFGNCK       0.785       Click here for PD Search       Click here for Cross-React search
48       56 CDKRCMEWE       0.766       Click here for PD Search       Click here for Cross-React search
3       11 KSSTSYLVF       0.754       Click here for PD Search       Click here for Cross-React search
110       118 PGGGAPPPA       0.739       Click here for PD Search       Click here for Cross-React search
108       116 APPGGGAPP       0.739       Click here for PD Search       Click here for Cross-React search
37       45 TWFGNCKDT       0.706       Click here for PD Search       Click here for Cross-React search
21       29 SEIASVNGK       0.68       Click here for PD Search       Click here for Cross-React search
26       34 VNGKVCEKP       0.658       Click here for PD Search       Click here for Cross-React search
34       42 PSKTWFGNC       0.607       Click here for PD Search       Click here for Cross-React search
52       60 CMEWEGAKH       0.595       Click here for PD Search       Click here for Cross-React search
25       33 SVNGKVCEK       0.57       Click here for PD Search       Click here for Cross-React search
135       143 PPAGGEGGG       0.519       Click here for PD Search       Click here for Cross-React search
127       135 GEGGGGAPP       0.519       Click here for PD Search       Click here for Cross-React search
116       124 PPAGGEGGG       0.519       Click here for PD Search       Click here for Cross-React search
147       155 DGGGGAPPA       0.511       Click here for PD Search       Click here for Cross-React search
106       114 GDAPPGGGA       0.511       Click here for PD Search       Click here for Cross-React search
146       154 GDGGGGAPP       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database