List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAMKMMKVFCVMVVCMVVSSSYAEAALTCSDVSNKILPCTSFLKQGGEVSADCCTGVKGL
NDAAKTTPDRQAACNCLKTTFKSNKDFKSDNAVVLPSKCGVNIPYKISLETDCNKVK

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
82       90 KSNKDFKSD       7.33       Click here for PD Search       Click here for Cross-React search
78       86 KTTFKSNKD       6.822       Click here for PD Search       Click here for Cross-React search
83       91 SNKDFKSDN       5.895       Click here for PD Search       Click here for Cross-React search
65       73 KTTPDRQAA       4.893       Click here for PD Search       Click here for Cross-React search
64       72 AKTTPDRQA       4.893       Click here for PD Search       Click here for Cross-React search
63       71 AAKTTPDRQ       4.893       Click here for PD Search       Click here for Cross-React search
62       70 DAAKTTPDR       4.718       Click here for PD Search       Click here for Cross-React search
84       92 NKDFKSDNA       4.444       Click here for PD Search       Click here for Cross-React search
80       88 TFKSNKDFK       4.093       Click here for PD Search       Click here for Cross-React search
61       69 NDAAKTTPD       3.874       Click here for PD Search       Click here for Cross-React search
81       89 FKSNKDFKS       3.801       Click here for PD Search       Click here for Cross-React search
77       85 LKTTFKSNK       3.369       Click here for PD Search       Click here for Cross-React search
79       87 TTFKSNKDF       2.954       Click here for PD Search       Click here for Cross-React search
104       112 PYKISLETD       2.059       Click here for PD Search       Click here for Cross-React search
85       93 KDFKSDNAV       2.051       Click here for PD Search       Click here for Cross-React search
60       68 LNDAAKTTP       1.913       Click here for PD Search       Click here for Cross-React search
58       66 KGLNDAAKT       1.697       Click here for PD Search       Click here for Cross-React search
67       75 TPDRQAACN       1.461       Click here for PD Search       Click here for Cross-React search
66       74 TTPDRQAAC       1.312       Click here for PD Search       Click here for Cross-React search
44       52 KQGGEVSAD       1.295       Click here for PD Search       Click here for Cross-React search
59       67 GLNDAAKTT       1.224       Click here for PD Search       Click here for Cross-React search
109       117 LETDCNKVK       1.157       Click here for PD Search       Click here for Cross-React search
40       48 TSFLKQGGE       1.066       Click here for PD Search       Click here for Cross-React search
102       110 NIPYKISLE       0.963       Click here for PD Search       Click here for Cross-React search
76       84 CLKTTFKSN       0.903       Click here for PD Search       Click here for Cross-React search
75       83 NCLKTTFKS       0.903       Click here for PD Search       Click here for Cross-React search
57       65 VKGLNDAAK       0.873       Click here for PD Search       Click here for Cross-React search
103       111 IPYKISLET       0.864       Click here for PD Search       Click here for Cross-React search
30       38 SDVSNKILP       0.841       Click here for PD Search       Click here for Cross-React search
20       28 SSYAEAALT       0.786       Click here for PD Search       Click here for Cross-React search
108       116 SLETDCNKV       0.776       Click here for PD Search       Click here for Cross-React search
86       94 DFKSDNAVV       0.761       Click here for PD Search       Click here for Cross-React search
107       115 ISLETDCNK       0.733       Click here for PD Search       Click here for Cross-React search
106       114 KISLETDCN       0.733       Click here for PD Search       Click here for Cross-React search
19       27 SSSYAEAAL       0.73       Click here for PD Search       Click here for Cross-React search
105       113 YKISLETDC       0.714       Click here for PD Search       Click here for Cross-React search
90       98 DNAVVLPSK       0.671       Click here for PD Search       Click here for Cross-React search
88       96 KSDNAVVLP       0.671       Click here for PD Search       Click here for Cross-React search
18       26 VSSSYAEAA       0.657       Click here for PD Search       Click here for Cross-React search
43       51 LKQGGEVSA       0.64       Click here for PD Search       Click here for Cross-React search
55       63 TGVKGLNDA       0.617       Click here for PD Search       Click here for Cross-React search
27       35 LTCSDVSNK       0.6       Click here for PD Search       Click here for Cross-React search
98       106 KCGVNIPYK       0.565       Click here for PD Search       Click here for Cross-React search
42       50 FLKQGGEVS       0.548       Click here for PD Search       Click here for Cross-React search
41       49 SFLKQGGEV       0.548       Click here for PD Search       Click here for Cross-React search
68       76 PDRQAACNC       0.543       Click here for PD Search       Click here for Cross-React search
33       41 SNKILPCTS       0.525       Click here for PD Search       Click here for Cross-React search
38       46 PCTSFLKQG       0.516       Click here for PD Search       Click here for Cross-React search
28       36 TCSDVSNKI       0.51       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database