List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MAPKKPDPKKDEAKAGAKAAAAPAPAPAPPPAPEPSKEPEFDPSKIKIEFTPEQIEEFKE
AFTLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPKQEELNSKMMDFDTFLP
MLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKLTEDEVEKLMAGQ
EDSNGCINYEAFVKHIMAG

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
4       12 KKPDPKKDE       11.509       Click here for PD Search       Click here for Cross-React search
3       11 PKKPDPKKD       10.276       Click here for PD Search       Click here for Cross-React search
2       10 APKKPDPKK       6.216       Click here for PD Search       Click here for Cross-React search
6       14 PDPKKDEAK       5.814       Click here for PD Search       Click here for Cross-React search
5       13 KPDPKKDEA       5.814       Click here for PD Search       Click here for Cross-React search
7       15 DPKKDEAKA       3.798       Click here for PD Search       Click here for Cross-React search
127       135 KNKDTGTYE       3.743       Click here for PD Search       Click here for Cross-React search
103       111 PKQEELNSK       3.557       Click here for PD Search       Click here for Cross-React search
102       110 KPKQEELNS       3.557       Click here for PD Search       Click here for Cross-React search
37       45 KEPEFDPSK       3.463       Click here for PD Search       Click here for Cross-React search
32       40 APEPSKEPE       3.24       Click here for PD Search       Click here for Cross-React search
128       136 NKDTGTYED       3.126       Click here for PD Search       Click here for Cross-React search
1       9 MAPKKPDPK       3.076       Click here for PD Search       Click here for Cross-React search
34       42 EPSKEPEFD       2.999       Click here for PD Search       Click here for Cross-React search
126       134 SKNKDTGTY       2.896       Click here for PD Search       Click here for Cross-React search
31       39 PAPEPSKEP       2.892       Click here for PD Search       Click here for Cross-React search
30       38 PPAPEPSKE       2.892       Click here for PD Search       Click here for Cross-React search
33       41 PEPSKEPEF       2.777       Click here for PD Search       Click here for Cross-React search
35       43 PSKEPEFDP       2.678       Click here for PD Search       Click here for Cross-React search
101       109 GKPKQEELN       2.627       Click here for PD Search       Click here for Cross-React search
29       37 PPPAPEPSK       2.583       Click here for PD Search       Click here for Cross-React search
36       44 SKEPEFDPS       2.321       Click here for PD Search       Click here for Cross-React search
104       112 KQEELNSKM       2.277       Click here for PD Search       Click here for Cross-React search
8       16 PKKDEAKAG       2.251       Click here for PD Search       Click here for Cross-React search
123       131 QHISKNKDT       2.138       Click here for PD Search       Click here for Cross-React search
167       175 KLTEDEVEK       1.909       Click here for PD Search       Click here for Cross-React search
52       60 PEQIEEFKE       1.822       Click here for PD Search       Click here for Cross-React search
129       137 KDTGTYEDF       1.683       Click here for PD Search       Click here for Cross-React search
66       74 DRTPKCEMK       1.671       Click here for PD Search       Click here for Cross-React search
166       174 EKLTEDEVE       1.654       Click here for PD Search       Click here for Cross-React search
51       59 TPEQIEEFK       1.518       Click here for PD Search       Click here for Cross-React search
27       35 PAPPPAPEP       1.505       Click here for PD Search       Click here for Cross-React search
10       18 KDEAKAGAK       1.471       Click here for PD Search       Click here for Cross-React search
9       17 KKDEAKAGA       1.471       Click here for PD Search       Click here for Cross-React search
39       47 PEFDPSKIK       1.402       Click here for PD Search       Click here for Cross-React search
98       106 RVLGKPKQE       1.371       Click here for PD Search       Click here for Cross-React search
100       108 LGKPKQEEL       1.347       Click here for PD Search       Click here for Cross-React search
49       57 EFTPEQIEE       1.315       Click here for PD Search       Click here for Cross-React search
28       36 APPPAPEPS       1.305       Click here for PD Search       Click here for Cross-React search
125       133 ISKNKDTGT       1.296       Click here for PD Search       Click here for Cross-React search
124       132 HISKNKDTG       1.222       Click here for PD Search       Click here for Cross-React search
122       130 LQHISKNKD       1.222       Click here for PD Search       Click here for Cross-React search
38       46 EPEFDPSKI       1.214       Click here for PD Search       Click here for Cross-React search
99       107 VLGKPKQEE       1.212       Click here for PD Search       Click here for Cross-React search
53       61 EQIEEFKEA       1.19       Click here for PD Search       Click here for Cross-React search
105       113 QEELNSKMM       1.127       Click here for PD Search       Click here for Cross-React search
106       114 EELNSKMMD       1.086       Click here for PD Search       Click here for Cross-React search
85       93 RALGQNPTQ       1.083       Click here for PD Search       Click here for Cross-React search
164       172 LGEKLTEDE       1.05       Click here for PD Search       Click here for Cross-React search
26       34 APAPPPAPE       0.983       Click here for PD Search       Click here for Cross-React search
87       95 LGQNPTQAE       0.958       Click here for PD Search       Click here for Cross-React search
169       177 TEDEVEKLM       0.945       Click here for PD Search       Click here for Cross-React search
165       173 GEKLTEDEV       0.945       Click here for PD Search       Click here for Cross-React search
109       117 NSKMMDFDT       0.917       Click here for PD Search       Click here for Cross-React search
174       182 EKLMAGQED       0.882       Click here for PD Search       Click here for Cross-React search
25       33 PAPAPPPAP       0.878       Click here for PD Search       Click here for Cross-React search
23       31 PAPAPAPPP       0.878       Click here for PD Search       Click here for Cross-React search
163       171 TLGEKLTED       0.875       Click here for PD Search       Click here for Cross-React search
88       96 GQNPTQAEV       0.862       Click here for PD Search       Click here for Cross-React search
90       98 NPTQAEVLR       0.812       Click here for PD Search       Click here for Cross-React search
62       70 FTLFDRTPK       0.812       Click here for PD Search       Click here for Cross-React search
168       176 LTEDEVEKL       0.787       Click here for PD Search       Click here for Cross-React search
11       19 DEAKAGAKA       0.743       Click here for PD Search       Click here for Cross-React search
65       73 FDRTPKCEM       0.724       Click here for PD Search       Click here for Cross-React search
121       129 MLQHISKNK       0.724       Click here for PD Search       Click here for Cross-React search
89       97 QNPTQAEVL       0.718       Click here for PD Search       Click here for Cross-React search
142       150 RVFDKEGNG       0.714       Click here for PD Search       Click here for Cross-React search
45       53 KIKIEFTPE       0.71       Click here for PD Search       Click here for Cross-React search
67       75 RTPKCEMKI       0.701       Click here for PD Search       Click here for Cross-React search
175       183 KLMAGQEDS       0.682       Click here for PD Search       Click here for Cross-React search
170       178 EDEVEKLMA       0.661       Click here for PD Search       Click here for Cross-React search
177       185 MAGQEDSNG       0.658       Click here for PD Search       Click here for Cross-React search
50       58 FTPEQIEEF       0.657       Click here for PD Search       Click here for Cross-React search
97       105 LRVLGKPKQ       0.653       Click here for PD Search       Click here for Cross-React search
131       139 TGTYEDFVE       0.648       Click here for PD Search       Click here for Cross-React search
139       147 EGLRVFDKE       0.641       Click here for PD Search       Click here for Cross-React search
59       67 KEAFTLFDR       0.636       Click here for PD Search       Click here for Cross-React search
42       50 DPSKIKIEF       0.635       Click here for PD Search       Click here for Cross-React search
41       49 FDPSKIKIE       0.635       Click here for PD Search       Click here for Cross-React search
40       48 EFDPSKIKI       0.635       Click here for PD Search       Click here for Cross-React search
130       138 DTGTYEDFV       0.625       Click here for PD Search       Click here for Cross-React search
47       55 KIEFTPEQI       0.615       Click here for PD Search       Click here for Cross-React search
46       54 IKIEFTPEQ       0.615       Click here for PD Search       Click here for Cross-React search
64       72 LFDRTPKCE       0.603       Click here for PD Search       Click here for Cross-React search
145       153 DKEGNGTVM       0.602       Click here for PD Search       Click here for Cross-React search
54       62 QIEEFKEAF       0.595       Click here for PD Search       Click here for Cross-React search
141       149 LRVFDKEGN       0.595       Click here for PD Search       Click here for Cross-React search
56       64 EEFKEAFTL       0.584       Click here for PD Search       Click here for Cross-React search
24       32 APAPAPPPA       0.574       Click here for PD Search       Click here for Cross-React search
22       30 APAPAPAPP       0.574       Click here for PD Search       Click here for Cross-React search
69       77 PKCEMKITY       0.561       Click here for PD Search       Click here for Cross-React search
120       128 PMLQHISKN       0.56       Click here for PD Search       Click here for Cross-React search
86       94 ALGQNPTQA       0.559       Click here for PD Search       Click here for Cross-React search
44       52 SKIKIEFTP       0.549       Click here for PD Search       Click here for Cross-React search
43       51 PSKIKIEFT       0.549       Click here for PD Search       Click here for Cross-React search
176       184 LMAGQEDSN       0.549       Click here for PD Search       Click here for Cross-React search
107       115 ELNSKMMDF       0.543       Click here for PD Search       Click here for Cross-React search
48       56 IEFTPEQIE       0.532       Click here for PD Search       Click here for Cross-React search
162       170 ATLGEKLTE       0.529       Click here for PD Search       Click here for Cross-React search
144       152 FDKEGNGTV       0.526       Click here for PD Search       Click here for Cross-React search
143       151 VFDKEGNGT       0.526       Click here for PD Search       Click here for Cross-React search
108       116 LNSKMMDFD       0.524       Click here for PD Search       Click here for Cross-React search
68       76 TPKCEMKIT       0.517       Click here for PD Search       Click here for Cross-React search
84       92 LRALGQNPT       0.516       Click here for PD Search       Click here for Cross-React search
63       71 TLFDRTPKC       0.502       Click here for PD Search       Click here for Cross-React search
134       142 YEDFVEGLR       0.502       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

Thanks for using SDAP Database