List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MARFTIVLAVLFAAALVSASAHKTVVTTSVAEEGEEENQRGCEWESRQCQMRHCMQWMRS
MRGQYEESFLRSAEANQGQFEHFRECCNELRDVKSHCRCEALRCMMRQMQQEYGMEQEMQ
QMQQMMQYLPRMCGMSYPTECRMRPIFA


Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
32       40 EEGEEENQR       7.516       Click here for PD Search       Click here for Cross-React search
33       41 EGEEENQRG       4.295       Click here for PD Search       Click here for Cross-React search
116       124 EQEMQQMQQ       4.09       Click here for PD Search       Click here for Cross-React search
31       39 AEEGEEENQ       3.877       Click here for PD Search       Click here for Cross-React search
110       118 QQEYGMEQE       3.7       Click here for PD Search       Click here for Cross-React search
59       67 RSMRGQYEE       3.662       Click here for PD Search       Click here for Cross-React search
60       68 SMRGQYEES       2.506       Click here for PD Search       Click here for Cross-React search
107       115 RQMQQEYGM       2.391       Click here for PD Search       Click here for Cross-React search
106       114 MRQMQQEYG       2.391       Click here for PD Search       Click here for Cross-React search
105       113 MMRQMQQEY       2.391       Click here for PD Search       Click here for Cross-React search
117       125 QEMQQMQQM       2.337       Click here for PD Search       Click here for Cross-React search
115       123 MEQEMQQMQ       2.337       Click here for PD Search       Click here for Cross-React search
35       43 EEENQRGCE       2.326       Click here for PD Search       Click here for Cross-React search
120       128 QQMQQMMQY       2.114       Click here for PD Search       Click here for Cross-React search
113       121 YGMEQEMQQ       2.114       Click here for PD Search       Click here for Cross-React search
112       120 EYGMEQEMQ       2.114       Click here for PD Search       Click here for Cross-React search
111       119 QEYGMEQEM       2.114       Click here for PD Search       Click here for Cross-React search
109       117 MQQEYGMEQ       2.114       Click here for PD Search       Click here for Cross-React search
108       116 QMQQEYGME       2.114       Click here for PD Search       Click here for Cross-React search
58       66 MRSMRGQYE       2.093       Click here for PD Search       Click here for Cross-React search
71       79 RSAEANQGQ       1.979       Click here for PD Search       Click here for Cross-React search
64       72 QYEESFLRS       1.827       Click here for PD Search       Click here for Cross-React search
88       96 NELRDVKSH       1.817       Click here for PD Search       Click here for Cross-React search
123       131 QQMMQYLPR       1.779       Click here for PD Search       Click here for Cross-React search
45       53 ESRQCQMRH       1.723       Click here for PD Search       Click here for Cross-React search
137       145 YPTECRMRP       1.703       Click here for PD Search       Click here for Cross-React search
30       38 VAEEGEEEN       1.662       Click here for PD Search       Click here for Cross-React search
61       69 MRGQYEESF       1.619       Click here for PD Search       Click here for Cross-React search
77       85 QGQFEHFRE       1.59       Click here for PD Search       Click here for Cross-React search
74       82 EANQGQFEH       1.523       Click here for PD Search       Click here for Cross-React search
76       84 NQGQFEHFR       1.476       Click here for PD Search       Click here for Cross-React search
136       144 SYPTECRMR       1.476       Click here for PD Search       Click here for Cross-React search
37       45 ENQRGCEWE       1.413       Click here for PD Search       Click here for Cross-React search
36       44 EENQRGCEW       1.413       Click here for PD Search       Click here for Cross-React search
56       64 QWMRSMRGQ       1.404       Click here for PD Search       Click here for Cross-React search
29       37 SVAEEGEEE       1.385       Click here for PD Search       Click here for Cross-React search
63       71 GQYEESFLR       1.349       Click here for PD Search       Click here for Cross-React search
62       70 RGQYEESFL       1.349       Click here for PD Search       Click here for Cross-React search
119       127 MQQMQQMMQ       1.335       Click here for PD Search       Click here for Cross-React search
118       126 EMQQMQQMM       1.335       Click here for PD Search       Click here for Cross-React search
114       122 GMEQEMQQM       1.335       Click here for PD Search       Click here for Cross-React search
44       52 WESRQCQMR       1.331       Click here for PD Search       Click here for Cross-React search
40       48 RGCEWESRQ       1.331       Click here for PD Search       Click here for Cross-React search
39       47 QRGCEWESR       1.331       Click here for PD Search       Click here for Cross-React search
34       42 GEEENQRGC       1.329       Click here for PD Search       Click here for Cross-React search
57       65 WMRSMRGQY       1.271       Click here for PD Search       Click here for Cross-React search
66       74 EESFLRSAE       1.178       Click here for PD Search       Click here for Cross-React search
43       51 EWESRQCQM       1.177       Click here for PD Search       Click here for Cross-React search
28       36 TSVAEEGEE       1.154       Click here for PD Search       Click here for Cross-React search
73       81 AEANQGQFE       1.131       Click here for PD Search       Click here for Cross-React search
38       46 NQRGCEWES       1.093       Click here for PD Search       Click here for Cross-React search
65       73 YEESFLRSA       1.066       Click here for PD Search       Click here for Cross-React search
124       132 QMMQYLPRM       1.017       Click here for PD Search       Click here for Cross-React search
121       129 QMQQMMQYL       1.007       Click here for PD Search       Click here for Cross-React search
27       35 TTSVAEEGE       0.962       Click here for PD Search       Click here for Cross-React search
70       78 LRSAEANQG       0.942       Click here for PD Search       Click here for Cross-React search
103       111 RCMMRQMQQ       0.925       Click here for PD Search       Click here for Cross-React search
122       130 MQQMMQYLP       0.899       Click here for PD Search       Click here for Cross-React search
72       80 SAEANQGQF       0.875       Click here for PD Search       Click here for Cross-React search
69       77 FLRSAEANQ       0.825       Click here for PD Search       Click here for Cross-React search
104       112 CMMRQMQQE       0.818       Click here for PD Search       Click here for Cross-React search
55       63 MQWMRSMRG       0.803       Click here for PD Search       Click here for Cross-React search
75       83 ANQGQFEHF       0.762       Click here for PD Search       Click here for Cross-React search
138       146 PTECRMRPI       0.762       Click here for PD Search       Click here for Cross-React search
135       143 MSYPTECRM       0.746       Click here for PD Search       Click here for Cross-React search
134       142 GMSYPTECR       0.746       Click here for PD Search       Click here for Cross-React search
87       95 CNELRDVKS       0.716       Click here for PD Search       Click here for Cross-React search
67       75 ESFLRSAEA       0.687       Click here for PD Search       Click here for Cross-React search
90       98 LRDVKSHCR       0.685       Click here for PD Search       Click here for Cross-React search
84       92 RECCNELRD       0.654       Click here for PD Search       Click here for Cross-React search
68       76 SFLRSAEAN       0.638       Click here for PD Search       Click here for Cross-React search
42       50 CEWESRQCQ       0.638       Click here for PD Search       Click here for Cross-React search
89       97 ELRDVKSHC       0.606       Click here for PD Search       Click here for Cross-React search
52       60 RHCMQWMRS       0.598       Click here for PD Search       Click here for Cross-React search
21       29 AHKTVVTTS       0.545       Click here for PD Search       Click here for Cross-React search
20       28 SAHKTVVTT       0.545       Click here for PD Search       Click here for Cross-React search
46       54 SRQCQMRHC       0.533       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/


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