List of B-cell epitopes predicted by BepiPred method ( using a window size of 9 amino acids)

>Input Sequence

MARGMKLACVVLVICMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKL
LAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVKF

Start Position       End Position       Peptide       Score       PD Search in SDAP       Cross-Reactivity Prediction
65       73 NTTPDRQAA       6.745       Click here for PD Search       Click here for Cross-React search
64       72 ANTTPDRQA       6.745       Click here for PD Search       Click here for Cross-React search
63       71 AANTTPDRQ       6.745       Click here for PD Search       Click here for Cross-React search
104       112 PYKISTTTN       4.956       Click here for PD Search       Click here for Cross-React search
62       70 AAANTTPDR       3.935       Click here for PD Search       Click here for Cross-React search
85       93 TKLNTNNAA       3.284       Click here for PD Search       Click here for Cross-React search
83       91 SITKLNTNN       3.023       Click here for PD Search       Click here for Cross-React search
44       52 TGGPGPSPQ       2.704       Click here for PD Search       Click here for Cross-React search
67       75 TPDRQAACN       2.505       Click here for PD Search       Click here for Cross-React search
102       110 NIPYKISTT       2.407       Click here for PD Search       Click here for Cross-React search
86       94 KLNTNNAAA       2.299       Click here for PD Search       Click here for Cross-React search
84       92 ITKLNTNNA       2.279       Click here for PD Search       Click here for Cross-React search
66       74 TTPDRQAAC       2.248       Click here for PD Search       Click here for Cross-React search
103       111 IPYKISTTT       2.161       Click here for PD Search       Click here for Cross-React search
109       117 TTTNCNTVK       2.011       Click here for PD Search       Click here for Cross-React search
82       90 GSITKLNTN       1.86       Click here for PD Search       Click here for Cross-React search
88       96 NTNNAAALP       1.778       Click here for PD Search       Click here for Cross-React search
106       114 KISTTTNCN       1.763       Click here for PD Search       Click here for Cross-React search
105       113 YKISTTTNC       1.718       Click here for PD Search       Click here for Cross-React search
61       69 LAAANTTPD       1.657       Click here for PD Search       Click here for Cross-React search
78       86 KSAAGSITK       1.653       Click here for PD Search       Click here for Cross-React search
90       98 NNAAALPGK       1.516       Click here for PD Search       Click here for Cross-React search
58       66 KKLLAAANT       1.466       Click here for PD Search       Click here for Cross-React search
41       49 TYLTGGPGP       1.405       Click here for PD Search       Click here for Cross-React search
108       116 STTTNCNTV       1.347       Click here for PD Search       Click here for Cross-React search
42       50 YLTGGPGPS       1.305       Click here for PD Search       Click here for Cross-React search
43       51 LTGGPGPSP       1.287       Click here for PD Search       Click here for Cross-React search
107       115 ISTTTNCNT       1.273       Click here for PD Search       Click here for Cross-React search
101       109 VNIPYKIST       1.238       Click here for PD Search       Click here for Cross-React search
110       118 TTNCNTVKF       1.206       Click here for PD Search       Click here for Cross-React search
81       89 AGSITKLNT       1.169       Click here for PD Search       Click here for Cross-React search
89       97 TNNAAALPG       1.094       Click here for PD Search       Click here for Cross-React search
59       67 KLLAAANTT       1.058       Click here for PD Search       Click here for Cross-React search
45       53 GGPGPSPQC       1.004       Click here for PD Search       Click here for Cross-React search
98       106 KCGVNIPYK       0.969       Click here for PD Search       Click here for Cross-React search
87       95 LNTNNAAAL       0.948       Click here for PD Search       Click here for Cross-React search
68       76 PDRQAACNC       0.931       Click here for PD Search       Click here for Cross-React search
30       38 GAVTSDLSP       0.923       Click here for PD Search       Click here for Cross-React search
34       42 SDLSPCLTY       0.861       Click here for PD Search       Click here for Cross-React search
100       108 GVNIPYKIS       0.849       Click here for PD Search       Click here for Cross-React search
80       88 AAGSITKLN       0.818       Click here for PD Search       Click here for Cross-React search
60       68 LLAAANTTP       0.818       Click here for PD Search       Click here for Cross-React search
33       41 TSDLSPCLT       0.793       Click here for PD Search       Click here for Cross-React search
57       65 VKKLLAAAN       0.754       Click here for PD Search       Click here for Cross-React search
40       48 LTYLTGGPG       0.749       Click here for PD Search       Click here for Cross-React search
79       87 SAAGSITKL       0.682       Click here for PD Search       Click here for Cross-React search
77       85 LKSAAGSIT       0.682       Click here for PD Search       Click here for Cross-React search
70       78 RQAACNCLK       0.594       Click here for PD Search       Click here for Cross-React search
75       83 NCLKSAAGS       0.581       Click here for PD Search       Click here for Cross-React search
20       28 APMAEGAIS       0.572       Click here for PD Search       Click here for Cross-React search
37       45 SPCLTYLTG       0.55       Click here for PD Search       Click here for Cross-React search
47       55 PGPSPQCCG       0.544       Click here for PD Search       Click here for Cross-React search
46       54 GPGPSPQCC       0.544       Click here for PD Search       Click here for Cross-React search
35       43 DLSPCLTYL       0.53       Click here for PD Search       Click here for Cross-React search
91       99 NAAALPGKC       0.505       Click here for PD Search       Click here for Cross-React search
51       59 PQCCGGVKK       0.504       Click here for PD Search       Click here for Cross-React search
31       39 AVTSDLSPC       0.5       Click here for PD Search       Click here for Cross-React search

Source: Epitopes are predicted using BepiPred webserver implemented in IEDB Analysis Resource at http://tools.iedb.org/main/bcell/

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